Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GAFA1Q96PS6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 AL691432.2-201ENST00000607222 2038 ntBASIC16.6■□□□□ 0.25
GAFA1Q96PS6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
GAFA1Q96PS6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.59■□□□□ 0.25
GAFA1Q96PS6 UNC93B4-201ENST00000505679 747 ntBASIC16.59■□□□□ 0.25
GAFA1Q96PS6 CD99P1-205ENST00000527459 561 ntBASIC16.59■□□□□ 0.25
GAFA1Q96PS6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GAFA1Q96PS6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
GAFA1Q96PS6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.58■□□□□ 0.25
GAFA1Q96PS6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.58■□□□□ 0.25
GAFA1Q96PS6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
GAFA1Q96PS6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 AC008687.6-201ENST00000596318 630 ntBASIC16.58■□□□□ 0.24
GAFA1Q96PS6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GAFA1Q96PS6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms