Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.54■□□□□ 0.88
RPRD1AQ96P16 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPRD1AQ96P16 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.52■□□□□ 0.88
RPRD1AQ96P16 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
RPRD1AQ96P16 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPRD1AQ96P16 BX119927.1-201ENST00000636596 1552 ntBASIC20.52■□□□□ 0.88
RPRD1AQ96P16 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.52■□□□□ 0.88
RPRD1AQ96P16 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPRD1AQ96P16 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.52■□□□□ 0.88
RPRD1AQ96P16 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.52■□□□□ 0.88
RPRD1AQ96P16 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPRD1AQ96P16 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.52■□□□□ 0.88
RPRD1AQ96P16 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
RPRD1AQ96P16 AL391422.3-201ENST00000603791 2761 ntBASIC20.52■□□□□ 0.88
RPRD1AQ96P16 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.52■□□□□ 0.88
RPRD1AQ96P16 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.52■□□□□ 0.87
RPRD1AQ96P16 AL162377.1-201ENST00000618844 1793 ntBASIC20.51■□□□□ 0.87
RPRD1AQ96P16 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.51■□□□□ 0.87
RPRD1AQ96P16 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPRD1AQ96P16 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.5■□□□□ 0.87
RPRD1AQ96P16 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPRD1AQ96P16 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.5■□□□□ 0.87
RPRD1AQ96P16 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
RPRD1AQ96P16 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.5■□□□□ 0.87
RPRD1AQ96P16 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPRD1AQ96P16 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.5■□□□□ 0.87
RPRD1AQ96P16 RN7SL471P-201ENST00000580476 299 ntBASIC20.5■□□□□ 0.87
RPRD1AQ96P16 AL121906.2-201ENST00000621597 723 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms