Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP54Q96N23 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP54Q96N23 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.66■□□□□ 0.74
CFAP54Q96N23 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP54Q96N23 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CFAP54Q96N23 AC104692.2-201ENST00000603054 253 ntBASIC19.66■□□□□ 0.74
CFAP54Q96N23 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP54Q96N23 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP54Q96N23 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.66■□□□□ 0.74
CFAP54Q96N23 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.65■□□□□ 0.74
CFAP54Q96N23 AC068473.5-201ENST00000616428 2072 ntBASIC19.65■□□□□ 0.74
CFAP54Q96N23 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 AC133561.1-201ENST00000568600 2415 ntBASIC19.65■□□□□ 0.74
CFAP54Q96N23 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.65■□□□□ 0.74
CFAP54Q96N23 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CFAP54Q96N23 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.65■□□□□ 0.74
CFAP54Q96N23 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.65■□□□□ 0.74
CFAP54Q96N23 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.65■□□□□ 0.74
CFAP54Q96N23 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.65■□□□□ 0.74
CFAP54Q96N23 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.65■□□□□ 0.74
CFAP54Q96N23 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP54Q96N23 KRT18P13-201ENST00000400056 1290 ntBASIC19.65■□□□□ 0.74
CFAP54Q96N23 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.65■□□□□ 0.74
CFAP54Q96N23 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.65■□□□□ 0.74
CFAP54Q96N23 AC083849.1-201ENST00000615227 514 ntBASIC19.65■□□□□ 0.74
CFAP54Q96N23 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CFAP54Q96N23 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CFAP54Q96N23 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 AL355385.1-201ENST00000606123 409 ntBASIC19.64■□□□□ 0.73
CFAP54Q96N23 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CFAP54Q96N23 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CFAP54Q96N23 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CFAP54Q96N23 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CFAP54Q96N23 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CFAP54Q96N23 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CFAP54Q96N23 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CFAP54Q96N23 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
CFAP54Q96N23 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CFAP54Q96N23 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.63■□□□□ 0.73
CFAP54Q96N23 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.63■□□□□ 0.73
CFAP54Q96N23 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.63■□□□□ 0.73
CFAP54Q96N23 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CFAP54Q96N23 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CFAP54Q96N23 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CFAP54Q96N23 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CFAP54Q96N23 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CFAP54Q96N23 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.63■□□□□ 0.73
CFAP54Q96N23 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CFAP54Q96N23 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CFAP54Q96N23 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CFAP54Q96N23 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.63■□□□□ 0.73
CFAP54Q96N23 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CFAP54Q96N23 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.63■□□□□ 0.73
CFAP54Q96N23 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CFAP54Q96N23 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CFAP54Q96N23 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CFAP54Q96N23 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CFAP54Q96N23 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CFAP54Q96N23 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CFAP54Q96N23 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CFAP54Q96N23 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CFAP54Q96N23 FAM99A-202ENST00000538190 1989 ntBASIC19.62■□□□□ 0.73
CFAP54Q96N23 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CFAP54Q96N23 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CFAP54Q96N23 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CFAP54Q96N23 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CFAP54Q96N23 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CFAP54Q96N23 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CFAP54Q96N23 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms