Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPG11Q96JI7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SPG11Q96JI7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPG11Q96JI7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPG11Q96JI7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SPG11Q96JI7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.96■□□□□ 0.31
SPG11Q96JI7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.96■□□□□ 0.31
SPG11Q96JI7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SPG11Q96JI7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.96■□□□□ 0.31
SPG11Q96JI7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SPG11Q96JI7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.96■□□□□ 0.31
SPG11Q96JI7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPG11Q96JI7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPG11Q96JI7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SPG11Q96JI7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SPG11Q96JI7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPG11Q96JI7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.96■□□□□ 0.31
SPG11Q96JI7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SPG11Q96JI7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.96■□□□□ 0.31
SPG11Q96JI7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SPG11Q96JI7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
SPG11Q96JI7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
SPG11Q96JI7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.96■□□□□ 0.3
SPG11Q96JI7 AC097488.1-201ENST00000507834 756 ntBASIC16.96■□□□□ 0.3
SPG11Q96JI7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPG11Q96JI7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPG11Q96JI7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SPG11Q96JI7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPG11Q96JI7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPG11Q96JI7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPG11Q96JI7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.95■□□□□ 0.3
SPG11Q96JI7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.95■□□□□ 0.3
SPG11Q96JI7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.95■□□□□ 0.3
SPG11Q96JI7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.95■□□□□ 0.3
SPG11Q96JI7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SPG11Q96JI7 AC011558.1-201ENST00000623459 338 ntBASIC16.95■□□□□ 0.3
SPG11Q96JI7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPG11Q96JI7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPG11Q96JI7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPG11Q96JI7 KRT8P36-201ENST00000489121 1440 ntBASIC16.95■□□□□ 0.3
SPG11Q96JI7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.95■□□□□ 0.3
SPG11Q96JI7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.95■□□□□ 0.3
SPG11Q96JI7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPG11Q96JI7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPG11Q96JI7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.95■□□□□ 0.3
SPG11Q96JI7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPG11Q96JI7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPG11Q96JI7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPG11Q96JI7 AC117947.1-201ENST00000427448 529 ntBASIC16.95■□□□□ 0.3
SPG11Q96JI7 B3GAT3P1-201ENST00000471720 806 ntBASIC16.95■□□□□ 0.3
SPG11Q96JI7 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.95■□□□□ 0.3
SPG11Q96JI7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SPG11Q96JI7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPG11Q96JI7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPG11Q96JI7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPG11Q96JI7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPG11Q96JI7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPG11Q96JI7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.94■□□□□ 0.3
SPG11Q96JI7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPG11Q96JI7 INGX-201ENST00000359239 846 ntBASIC16.94■□□□□ 0.3
SPG11Q96JI7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPG11Q96JI7 AP000593.1-201ENST00000393668 712 ntBASIC16.94■□□□□ 0.3
SPG11Q96JI7 AL450487.1-201ENST00000426799 995 ntBASIC16.94■□□□□ 0.3
SPG11Q96JI7 HCG4P8-203ENST00000443049 980 ntBASIC16.94■□□□□ 0.3
SPG11Q96JI7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.94■□□□□ 0.3
SPG11Q96JI7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPG11Q96JI7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SPG11Q96JI7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPG11Q96JI7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPG11Q96JI7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPG11Q96JI7 HMGA1P5-201ENST00000412453 271 ntBASIC16.94■□□□□ 0.3
SPG11Q96JI7 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.94■□□□□ 0.3
SPG11Q96JI7 FAM207BP-201ENST00000447172 505 ntBASIC16.94■□□□□ 0.3
SPG11Q96JI7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.94■□□□□ 0.3
SPG11Q96JI7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.94■□□□□ 0.3
SPG11Q96JI7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPG11Q96JI7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.94■□□□□ 0.3
SPG11Q96JI7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.94■□□□□ 0.3
SPG11Q96JI7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.93■□□□□ 0.3
SPG11Q96JI7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SPG11Q96JI7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SPG11Q96JI7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPG11Q96JI7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SPG11Q96JI7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPG11Q96JI7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPG11Q96JI7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SPG11Q96JI7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SPG11Q96JI7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPG11Q96JI7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
SPG11Q96JI7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.93■□□□□ 0.3
SPG11Q96JI7 EGLN1P1-201ENST00000531623 762 ntBASIC16.93■□□□□ 0.3
SPG11Q96JI7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SPG11Q96JI7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPG11Q96JI7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.93■□□□□ 0.3
SPG11Q96JI7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPG11Q96JI7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.93■□□□□ 0.3
SPG11Q96JI7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPG11Q96JI7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPG11Q96JI7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPG11Q96JI7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms