Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHDQ96IW2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHDQ96IW2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHDQ96IW2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.21■□□□□ 0.83
SHDQ96IW2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.21■□□□□ 0.83
SHDQ96IW2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHDQ96IW2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.21■□□□□ 0.83
SHDQ96IW2 FAM87A-204ENST00000613235 858 ntBASIC20.21■□□□□ 0.83
SHDQ96IW2 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.21■□□□□ 0.83
SHDQ96IW2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHDQ96IW2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHDQ96IW2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHDQ96IW2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHDQ96IW2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHDQ96IW2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.2■□□□□ 0.82
SHDQ96IW2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHDQ96IW2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHDQ96IW2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SHDQ96IW2 RNF152P1-201ENST00000397754 604 ntBASIC20.2■□□□□ 0.82
SHDQ96IW2 FAM8A6P-201ENST00000407496 1135 ntBASIC20.2■□□□□ 0.82
SHDQ96IW2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.2■□□□□ 0.82
SHDQ96IW2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHDQ96IW2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.2■□□□□ 0.82
SHDQ96IW2 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.2■□□□□ 0.82
SHDQ96IW2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.2■□□□□ 0.82
SHDQ96IW2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHDQ96IW2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHDQ96IW2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.2■□□□□ 0.82
SHDQ96IW2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHDQ96IW2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SHDQ96IW2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHDQ96IW2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHDQ96IW2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SHDQ96IW2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.19■□□□□ 0.82
SHDQ96IW2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.19■□□□□ 0.82
SHDQ96IW2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHDQ96IW2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHDQ96IW2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
SHDQ96IW2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHDQ96IW2 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.19■□□□□ 0.82
SHDQ96IW2 AC011506.1-201ENST00000474329 610 ntBASIC20.19■□□□□ 0.82
SHDQ96IW2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.19■□□□□ 0.82
SHDQ96IW2 SLC25A1P4-201ENST00000567977 778 ntBASIC20.19■□□□□ 0.82
SHDQ96IW2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
SHDQ96IW2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.19■□□□□ 0.82
SHDQ96IW2 AC116562.4-202ENST00000641738 218 ntBASIC20.19■□□□□ 0.82
SHDQ96IW2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.19■□□□□ 0.82
SHDQ96IW2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SHDQ96IW2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHDQ96IW2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHDQ96IW2 KRT8P17-201ENST00000453110 1448 ntBASIC20.19■□□□□ 0.82
SHDQ96IW2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHDQ96IW2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHDQ96IW2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.18■□□□□ 0.82
SHDQ96IW2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHDQ96IW2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHDQ96IW2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.18■□□□□ 0.82
SHDQ96IW2 AC117947.1-201ENST00000427448 529 ntBASIC20.18■□□□□ 0.82
SHDQ96IW2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.18■□□□□ 0.82
SHDQ96IW2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.18■□□□□ 0.82
SHDQ96IW2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHDQ96IW2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.18■□□□□ 0.82
SHDQ96IW2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHDQ96IW2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SHDQ96IW2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
SHDQ96IW2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SHDQ96IW2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.18■□□□□ 0.82
SHDQ96IW2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SHDQ96IW2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHDQ96IW2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.17■□□□□ 0.82
SHDQ96IW2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SHDQ96IW2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.17■□□□□ 0.82
SHDQ96IW2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHDQ96IW2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.17■□□□□ 0.82
SHDQ96IW2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHDQ96IW2 AC004980.1-204ENST00000429707 299 ntBASIC20.17■□□□□ 0.82
SHDQ96IW2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.17■□□□□ 0.82
SHDQ96IW2 CCR12P-201ENST00000446203 998 ntBASIC20.17■□□□□ 0.82
SHDQ96IW2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.17■□□□□ 0.82
SHDQ96IW2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.17■□□□□ 0.82
SHDQ96IW2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.17■□□□□ 0.82
SHDQ96IW2 KRT18P56-201ENST00000507275 550 ntBASIC20.17■□□□□ 0.82
SHDQ96IW2 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.17■□□□□ 0.82
SHDQ96IW2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.17■□□□□ 0.82
SHDQ96IW2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHDQ96IW2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHDQ96IW2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHDQ96IW2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHDQ96IW2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHDQ96IW2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHDQ96IW2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SHDQ96IW2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHDQ96IW2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHDQ96IW2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHDQ96IW2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.16■□□□□ 0.82
SHDQ96IW2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SHDQ96IW2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.16■□□□□ 0.82
SHDQ96IW2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHDQ96IW2 YBX1P10-201ENST00000444752 975 ntBASIC20.16■□□□□ 0.82
SHDQ96IW2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms