Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE2Q96FN4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE2Q96FN4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE2Q96FN4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.27■□□□□ 0.35
CPNE2Q96FN4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.27■□□□□ 0.35
CPNE2Q96FN4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.27■□□□□ 0.35
CPNE2Q96FN4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE2Q96FN4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.27■□□□□ 0.35
CPNE2Q96FN4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CPNE2Q96FN4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 BX119927.1-201ENST00000636596 1552 ntBASIC17.25■□□□□ 0.35
CPNE2Q96FN4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.25■□□□□ 0.35
CPNE2Q96FN4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.25■□□□□ 0.35
CPNE2Q96FN4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 AC013268.1-206ENST00000638368 961 ntBASIC17.24■□□□□ 0.35
CPNE2Q96FN4 AC112229.1-201ENST00000639295 961 ntBASIC17.24■□□□□ 0.35
CPNE2Q96FN4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE2Q96FN4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE2Q96FN4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE2Q96FN4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE2Q96FN4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE2Q96FN4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE2Q96FN4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CPNE2Q96FN4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE2Q96FN4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms