Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.35■□□□□ 0.85
RTP4Q96DX8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.35■□□□□ 0.85
RTP4Q96DX8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.35■□□□□ 0.85
RTP4Q96DX8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTP4Q96DX8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTP4Q96DX8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RTP4Q96DX8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTP4Q96DX8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTP4Q96DX8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTP4Q96DX8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RTP4Q96DX8 AC083906.2-201ENST00000511578 360 ntBASIC20.35■□□□□ 0.85
RTP4Q96DX8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTP4Q96DX8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.35■□□□□ 0.85
RTP4Q96DX8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTP4Q96DX8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.35■□□□□ 0.85
RTP4Q96DX8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.35■□□□□ 0.85
RTP4Q96DX8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTP4Q96DX8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.35■□□□□ 0.85
RTP4Q96DX8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTP4Q96DX8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTP4Q96DX8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTP4Q96DX8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.35■□□□□ 0.85
RTP4Q96DX8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTP4Q96DX8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTP4Q96DX8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTP4Q96DX8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTP4Q96DX8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.34■□□□□ 0.85
RTP4Q96DX8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTP4Q96DX8 AC142086.2-201ENST00000569753 217 ntBASIC20.34■□□□□ 0.85
RTP4Q96DX8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTP4Q96DX8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RTP4Q96DX8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTP4Q96DX8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RTP4Q96DX8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
RTP4Q96DX8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTP4Q96DX8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTP4Q96DX8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTP4Q96DX8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.34■□□□□ 0.85
RTP4Q96DX8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTP4Q96DX8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.33■□□□□ 0.85
RTP4Q96DX8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.33■□□□□ 0.85
RTP4Q96DX8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RTP4Q96DX8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RTP4Q96DX8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RTP4Q96DX8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTP4Q96DX8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTP4Q96DX8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
RTP4Q96DX8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RTP4Q96DX8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RTP4Q96DX8 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.33■□□□□ 0.85
RTP4Q96DX8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RTP4Q96DX8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTP4Q96DX8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.33■□□□□ 0.84
RTP4Q96DX8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTP4Q96DX8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTP4Q96DX8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.32■□□□□ 0.84
RTP4Q96DX8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.32■□□□□ 0.84
RTP4Q96DX8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.32■□□□□ 0.84
RTP4Q96DX8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RTP4Q96DX8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.32■□□□□ 0.84
RTP4Q96DX8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTP4Q96DX8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTP4Q96DX8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTP4Q96DX8 TSPY6P-201ENST00000448518 926 ntBASIC20.32■□□□□ 0.84
RTP4Q96DX8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.32■□□□□ 0.84
RTP4Q96DX8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.32■□□□□ 0.84
RTP4Q96DX8 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.32■□□□□ 0.84
RTP4Q96DX8 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.32■□□□□ 0.84
RTP4Q96DX8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTP4Q96DX8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTP4Q96DX8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTP4Q96DX8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTP4Q96DX8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTP4Q96DX8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTP4Q96DX8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RTP4Q96DX8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTP4Q96DX8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTP4Q96DX8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTP4Q96DX8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.32■□□□□ 0.84
RTP4Q96DX8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTP4Q96DX8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RTP4Q96DX8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RTP4Q96DX8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTP4Q96DX8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RTP4Q96DX8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTP4Q96DX8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTP4Q96DX8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTP4Q96DX8 ABHD17AP1-201ENST00000358206 933 ntBASIC20.31■□□□□ 0.84
RTP4Q96DX8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.31■□□□□ 0.84
RTP4Q96DX8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.31■□□□□ 0.84
RTP4Q96DX8 GUSBP6-202ENST00000438529 1198 ntBASIC20.31■□□□□ 0.84
RTP4Q96DX8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.31■□□□□ 0.84
RTP4Q96DX8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTP4Q96DX8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RTP4Q96DX8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RTP4Q96DX8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RTP4Q96DX8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RTP4Q96DX8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RTP4Q96DX8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTP4Q96DX8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms