Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC25.67■■□□□ 1.7
ZNF428Q96B54 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZNF428Q96B54 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ZNF428Q96B54 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC25.67■■□□□ 1.7
ZNF428Q96B54 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
ZNF428Q96B54 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZNF428Q96B54 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
ZNF428Q96B54 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZNF428Q96B54 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ZNF428Q96B54 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZNF428Q96B54 AL390719.1-204ENST00000412397 1219 ntBASIC25.67■■□□□ 1.7
ZNF428Q96B54 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ZNF428Q96B54 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZNF428Q96B54 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
ZNF428Q96B54 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZNF428Q96B54 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ZNF428Q96B54 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZNF428Q96B54 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZNF428Q96B54 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
ZNF428Q96B54 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC25.66■■□□□ 1.7
ZNF428Q96B54 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF428Q96B54 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC25.66■■□□□ 1.7
ZNF428Q96B54 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF428Q96B54 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF428Q96B54 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
ZNF428Q96B54 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF428Q96B54 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.66■■□□□ 1.7
ZNF428Q96B54 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC25.66■■□□□ 1.7
ZNF428Q96B54 SPIB-206ENST00000596074 847 ntTSL 2 BASIC25.66■■□□□ 1.7
ZNF428Q96B54 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF428Q96B54 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF428Q96B54 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF428Q96B54 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF428Q96B54 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF428Q96B54 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF428Q96B54 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF428Q96B54 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZNF428Q96B54 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC25.65■■□□□ 1.7
ZNF428Q96B54 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ZNF428Q96B54 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
ZNF428Q96B54 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC25.65■■□□□ 1.7
ZNF428Q96B54 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC25.65■■□□□ 1.7
ZNF428Q96B54 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ZNF428Q96B54 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZNF428Q96B54 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZNF428Q96B54 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZNF428Q96B54 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZNF428Q96B54 RER1-204ENST00000378518 522 ntTSL 3 BASIC25.65■■□□□ 1.7
ZNF428Q96B54 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC25.65■■□□□ 1.7
ZNF428Q96B54 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC25.65■■□□□ 1.7
ZNF428Q96B54 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZNF428Q96B54 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZNF428Q96B54 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZNF428Q96B54 MME-217ENST00000616757 1315 ntTSL 5 BASIC25.64■■□□□ 1.7
ZNF428Q96B54 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
ZNF428Q96B54 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC25.64■■□□□ 1.7
ZNF428Q96B54 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ZNF428Q96B54 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ZNF428Q96B54 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ZNF428Q96B54 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ZNF428Q96B54 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC25.64■■□□□ 1.7
ZNF428Q96B54 KRT17P3-201ENST00000420566 1262 ntBASIC25.64■■□□□ 1.7
ZNF428Q96B54 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC25.64■■□□□ 1.7
ZNF428Q96B54 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC25.64■■□□□ 1.7
ZNF428Q96B54 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ZNF428Q96B54 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC25.64■■□□□ 1.69
ZNF428Q96B54 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ZNF428Q96B54 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.69
ZNF428Q96B54 PKD1P6-201ENST00000343738 4769 ntBASIC25.63■■□□□ 1.69
ZNF428Q96B54 AC124283.5-201ENST00000624661 1809 ntBASIC25.63■■□□□ 1.69
ZNF428Q96B54 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ZNF428Q96B54 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ZNF428Q96B54 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC25.63■■□□□ 1.69
ZNF428Q96B54 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC25.63■■□□□ 1.69
ZNF428Q96B54 AC008550.1-201ENST00000511500 884 ntBASIC25.63■■□□□ 1.69
ZNF428Q96B54 RN7SL471P-201ENST00000580476 299 ntBASIC25.63■■□□□ 1.69
ZNF428Q96B54 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC25.63■■□□□ 1.69
ZNF428Q96B54 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC25.63■■□□□ 1.69
ZNF428Q96B54 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ZNF428Q96B54 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ZNF428Q96B54 GOLGA2P11-201ENST00000562660 1621 ntBASIC25.63■■□□□ 1.69
ZNF428Q96B54 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
ZNF428Q96B54 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC25.62■■□□□ 1.69
ZNF428Q96B54 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC25.62■■□□□ 1.69
ZNF428Q96B54 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ZNF428Q96B54 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
ZNF428Q96B54 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ZNF428Q96B54 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC25.62■■□□□ 1.69
ZNF428Q96B54 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ZNF428Q96B54 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC25.62■■□□□ 1.69
ZNF428Q96B54 HES2-206ENST00000489730 730 ntTSL 2 BASIC25.62■■□□□ 1.69
ZNF428Q96B54 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
ZNF428Q96B54 MAX-217ENST00000557277 728 ntTSL 3 BASIC25.62■■□□□ 1.69
ZNF428Q96B54 AP006294.2-201ENST00000641667 209 ntBASIC25.62■■□□□ 1.69
ZNF428Q96B54 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ZNF428Q96B54 AL691432.2-201ENST00000607222 2038 ntBASIC25.62■■□□□ 1.69
ZNF428Q96B54 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ZNF428Q96B54 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ZNF428Q96B54 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC25.62■■□□□ 1.69
ZNF428Q96B54 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms