Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BCAS4Q8TDM0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.03■□□□□ 0.8
BCAS4Q8TDM0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
BCAS4Q8TDM0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.03■□□□□ 0.8
BCAS4Q8TDM0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS4Q8TDM0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS4Q8TDM0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS4Q8TDM0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS4Q8TDM0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS4Q8TDM0 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.02■□□□□ 0.8
BCAS4Q8TDM0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.02■□□□□ 0.8
BCAS4Q8TDM0 AC010525.1-201ENST00000585559 441 ntBASIC20.02■□□□□ 0.8
BCAS4Q8TDM0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.02■□□□□ 0.8
BCAS4Q8TDM0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS4Q8TDM0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS4Q8TDM0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.02■□□□□ 0.8
BCAS4Q8TDM0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
BCAS4Q8TDM0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BCAS4Q8TDM0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.02■□□□□ 0.79
BCAS4Q8TDM0 NOC2LP2-201ENST00000407594 1944 ntBASIC20.02■□□□□ 0.79
BCAS4Q8TDM0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
BCAS4Q8TDM0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
BCAS4Q8TDM0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
BCAS4Q8TDM0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BCAS4Q8TDM0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BCAS4Q8TDM0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BCAS4Q8TDM0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
BCAS4Q8TDM0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
BCAS4Q8TDM0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20■□□□□ 0.79
BCAS4Q8TDM0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
BCAS4Q8TDM0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
BCAS4Q8TDM0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
BCAS4Q8TDM0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20■□□□□ 0.79
BCAS4Q8TDM0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
BCAS4Q8TDM0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
BCAS4Q8TDM0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20■□□□□ 0.79
BCAS4Q8TDM0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20■□□□□ 0.79
BCAS4Q8TDM0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
BCAS4Q8TDM0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
BCAS4Q8TDM0 AL117332.1-201ENST00000622628 974 ntBASIC20■□□□□ 0.79
BCAS4Q8TDM0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20■□□□□ 0.79
BCAS4Q8TDM0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
BCAS4Q8TDM0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BCAS4Q8TDM0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BCAS4Q8TDM0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BCAS4Q8TDM0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BCAS4Q8TDM0 AC068880.1-201ENST00000507289 2297 ntBASIC20■□□□□ 0.79
BCAS4Q8TDM0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 MIR2861-201ENST00000636310 90 ntBASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BCAS4Q8TDM0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BCAS4Q8TDM0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BCAS4Q8TDM0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.98■□□□□ 0.79
BCAS4Q8TDM0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
BCAS4Q8TDM0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
BCAS4Q8TDM0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms