Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHD5Q8TDI0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CHD5Q8TDI0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.25■□□□□ 0.83
CHD5Q8TDI0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 C1QBPP2-201ENST00000528754 825 ntBASIC20.24■□□□□ 0.83
CHD5Q8TDI0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CHD5Q8TDI0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 HLA-G-202ENST00000376815 851 ntBASIC20.23■□□□□ 0.83
CHD5Q8TDI0 HLA-G-203ENST00000376818 1127 ntBASIC20.23■□□□□ 0.83
CHD5Q8TDI0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.23■□□□□ 0.83
CHD5Q8TDI0 AC066615.1-201ENST00000640911 628 ntBASIC20.23■□□□□ 0.83
CHD5Q8TDI0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 AC116351.2-201ENST00000606540 1585 ntBASIC20.22■□□□□ 0.83
CHD5Q8TDI0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 KRT16P6-202ENST00000425692 1426 ntBASIC20.22■□□□□ 0.83
CHD5Q8TDI0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD5Q8TDI0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 TFP1-202ENST00000475455 1573 ntBASIC20.21■□□□□ 0.83
CHD5Q8TDI0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 AC239809.2-201ENST00000415381 517 ntBASIC20.21■□□□□ 0.83
CHD5Q8TDI0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.21■□□□□ 0.83
CHD5Q8TDI0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD5Q8TDI0 AC012618.2-201ENST00000428058 849 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms