Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 AC124016.1-201ENST00000609552 612 ntBASIC21.46■■□□□ 1.03
BEST2Q8NFU1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
BEST2Q8NFU1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.45■■□□□ 1.03
BEST2Q8NFU1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.45■■□□□ 1.03
BEST2Q8NFU1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 KRASP1-201ENST00000407852 552 ntBASIC21.45■■□□□ 1.02
BEST2Q8NFU1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 AC133681.1-201ENST00000465482 601 ntBASIC21.45■■□□□ 1.02
BEST2Q8NFU1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
BEST2Q8NFU1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 RPS2P4-201ENST00000476944 856 ntBASIC21.44■■□□□ 1.02
BEST2Q8NFU1 AC008550.1-201ENST00000511500 884 ntBASIC21.44■■□□□ 1.02
BEST2Q8NFU1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.44■■□□□ 1.02
BEST2Q8NFU1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BEST2Q8NFU1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BEST2Q8NFU1 GABARAPL3-202ENST00000624044 1851 ntBASIC21.43■■□□□ 1.02
BEST2Q8NFU1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
BEST2Q8NFU1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BEST2Q8NFU1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BEST2Q8NFU1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BEST2Q8NFU1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.43■■□□□ 1.02
BEST2Q8NFU1 AC110285.5-201ENST00000611501 352 ntBASIC21.43■■□□□ 1.02
BEST2Q8NFU1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.43■■□□□ 1.02
BEST2Q8NFU1 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.43■■□□□ 1.02
BEST2Q8NFU1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BEST2Q8NFU1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
BEST2Q8NFU1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
BEST2Q8NFU1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.42■■□□□ 1.02
BEST2Q8NFU1 BX119927.1-201ENST00000636596 1552 ntBASIC21.42■■□□□ 1.02
BEST2Q8NFU1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms