Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 TMEM179-206ENST00000616017 1645 ntBASIC18.66■□□□□ 0.58
NUP43Q8NFH3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 AC023632.3-201ENST00000521633 145 ntBASIC18.65■□□□□ 0.58
NUP43Q8NFH3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
NUP43Q8NFH3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NUP43Q8NFH3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
NUP43Q8NFH3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NUP43Q8NFH3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 GPX1P1-201ENST00000388829 606 ntBASIC18.64■□□□□ 0.57
NUP43Q8NFH3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 NCF1B-203ENST00000435988 1254 ntBASIC18.64■□□□□ 0.57
NUP43Q8NFH3 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.64■□□□□ 0.57
NUP43Q8NFH3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP43Q8NFH3 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.63■□□□□ 0.57
NUP43Q8NFH3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 SLC29A4P1-201ENST00000398760 971 ntBASIC18.63■□□□□ 0.57
NUP43Q8NFH3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUP43Q8NFH3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms