Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.71■□□□□ 0.75
CPNE9Q8IYJ1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CPNE9Q8IYJ1 AC083906.2-201ENST00000511578 360 ntBASIC19.71■□□□□ 0.75
CPNE9Q8IYJ1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CPNE9Q8IYJ1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.71■□□□□ 0.75
CPNE9Q8IYJ1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE9Q8IYJ1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE9Q8IYJ1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.71■□□□□ 0.75
CPNE9Q8IYJ1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.71■□□□□ 0.75
CPNE9Q8IYJ1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.71■□□□□ 0.75
CPNE9Q8IYJ1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
CPNE9Q8IYJ1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE9Q8IYJ1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 AL031963.3-201ENST00000606441 850 ntBASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE9Q8IYJ1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE9Q8IYJ1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE9Q8IYJ1 AC087289.5-201ENST00000586076 3175 ntBASIC19.69■□□□□ 0.74
CPNE9Q8IYJ1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE9Q8IYJ1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.69■□□□□ 0.74
CPNE9Q8IYJ1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.69■□□□□ 0.74
CPNE9Q8IYJ1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CPNE9Q8IYJ1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE9Q8IYJ1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CPNE9Q8IYJ1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.69■□□□□ 0.74
CPNE9Q8IYJ1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.69■□□□□ 0.74
CPNE9Q8IYJ1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.69■□□□□ 0.74
CPNE9Q8IYJ1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE9Q8IYJ1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE9Q8IYJ1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 KRT8P20-201ENST00000423953 1409 ntBASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 MIPEPP3-201ENST00000412105 444 ntBASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE9Q8IYJ1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 AL020996.1-203ENST00000536896 2307 ntBASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 GUSBP6-202ENST00000438529 1198 ntBASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms