Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.83■□□□□ 0.76
TRIM42Q8IWZ5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM42Q8IWZ5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TRIM42Q8IWZ5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM42Q8IWZ5 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.83■□□□□ 0.76
TRIM42Q8IWZ5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM42Q8IWZ5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM42Q8IWZ5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRIM42Q8IWZ5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 AC120498.9-201ENST00000339021 3867 ntBASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 AC010141.2-201ENST00000452426 721 ntBASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM42Q8IWZ5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM42Q8IWZ5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM42Q8IWZ5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM42Q8IWZ5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TRIM42Q8IWZ5 AC007322.3-201ENST00000426526 701 ntBASIC19.8■□□□□ 0.76
TRIM42Q8IWZ5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM42Q8IWZ5 AL354811.1-201ENST00000610286 706 ntBASIC19.8■□□□□ 0.76
TRIM42Q8IWZ5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM42Q8IWZ5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM42Q8IWZ5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM42Q8IWZ5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM42Q8IWZ5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM42Q8IWZ5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM42Q8IWZ5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 RARRES2P6-201ENST00000567333 442 ntBASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM42Q8IWZ5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms