Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK2Q86Y07 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
VRK2Q86Y07 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK2Q86Y07 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VRK2Q86Y07 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
VRK2Q86Y07 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK2Q86Y07 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK2Q86Y07 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK2Q86Y07 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.43■□□□□ 0.54
VRK2Q86Y07 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK2Q86Y07 AL031963.3-201ENST00000606441 850 ntBASIC18.43■□□□□ 0.54
VRK2Q86Y07 AC073111.5-205ENST00000641717 521 ntBASIC18.43■□□□□ 0.54
VRK2Q86Y07 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
VRK2Q86Y07 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK2Q86Y07 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK2Q86Y07 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK2Q86Y07 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VRK2Q86Y07 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
VRK2Q86Y07 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK2Q86Y07 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
VRK2Q86Y07 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK2Q86Y07 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
VRK2Q86Y07 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.42■□□□□ 0.54
VRK2Q86Y07 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VRK2Q86Y07 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
VRK2Q86Y07 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VRK2Q86Y07 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VRK2Q86Y07 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VRK2Q86Y07 MIR935-201ENST00000401179 91 ntBASIC18.42■□□□□ 0.54
VRK2Q86Y07 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.42■□□□□ 0.54
VRK2Q86Y07 AL512625.2-201ENST00000417533 625 ntBASIC18.42■□□□□ 0.54
VRK2Q86Y07 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VRK2Q86Y07 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.42■□□□□ 0.54
VRK2Q86Y07 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
VRK2Q86Y07 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.42■□□□□ 0.54
VRK2Q86Y07 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.42■□□□□ 0.54
VRK2Q86Y07 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.42■□□□□ 0.54
VRK2Q86Y07 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
VRK2Q86Y07 AL589743.5-201ENST00000616611 1050 ntBASIC18.42■□□□□ 0.54
VRK2Q86Y07 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.42■□□□□ 0.54
VRK2Q86Y07 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VRK2Q86Y07 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VRK2Q86Y07 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VRK2Q86Y07 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VRK2Q86Y07 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VRK2Q86Y07 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VRK2Q86Y07 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VRK2Q86Y07 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
VRK2Q86Y07 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
VRK2Q86Y07 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VRK2Q86Y07 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.41■□□□□ 0.54
VRK2Q86Y07 KRT8P20-201ENST00000423953 1409 ntBASIC18.41■□□□□ 0.54
VRK2Q86Y07 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VRK2Q86Y07 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VRK2Q86Y07 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VRK2Q86Y07 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
VRK2Q86Y07 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VRK2Q86Y07 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VRK2Q86Y07 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VRK2Q86Y07 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VRK2Q86Y07 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.41■□□□□ 0.54
VRK2Q86Y07 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VRK2Q86Y07 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VRK2Q86Y07 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VRK2Q86Y07 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.41■□□□□ 0.54
VRK2Q86Y07 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VRK2Q86Y07 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VRK2Q86Y07 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VRK2Q86Y07 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
VRK2Q86Y07 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.4■□□□□ 0.54
VRK2Q86Y07 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK2Q86Y07 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VRK2Q86Y07 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK2Q86Y07 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK2Q86Y07 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
VRK2Q86Y07 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VRK2Q86Y07 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK2Q86Y07 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.4■□□□□ 0.54
VRK2Q86Y07 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.4■□□□□ 0.54
VRK2Q86Y07 CDCA4P2-201ENST00000441182 718 ntBASIC18.4■□□□□ 0.54
VRK2Q86Y07 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VRK2Q86Y07 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.4■□□□□ 0.54
VRK2Q86Y07 C2orf69P4-201ENST00000565394 541 ntBASIC18.4■□□□□ 0.54
VRK2Q86Y07 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.4■□□□□ 0.54
VRK2Q86Y07 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.4■□□□□ 0.54
VRK2Q86Y07 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.4■□□□□ 0.54
VRK2Q86Y07 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK2Q86Y07 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK2Q86Y07 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK2Q86Y07 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VRK2Q86Y07 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK2Q86Y07 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK2Q86Y07 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.4■□□□□ 0.54
VRK2Q86Y07 KRT16P6-202ENST00000425692 1426 ntBASIC18.4■□□□□ 0.54
VRK2Q86Y07 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VRK2Q86Y07 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VRK2Q86Y07 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.54
VRK2Q86Y07 AC116562.4-201ENST00000641316 2276 ntBASIC18.39■□□□□ 0.54
VRK2Q86Y07 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VRK2Q86Y07 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms