Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTTNQ86VV8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTTNQ86VV8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.56■□□□□ 0.4
RTTNQ86VV8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTTNQ86VV8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.56■□□□□ 0.4
RTTNQ86VV8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.56■□□□□ 0.4
RTTNQ86VV8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.56■□□□□ 0.4
RTTNQ86VV8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
RTTNQ86VV8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.56■□□□□ 0.4
RTTNQ86VV8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTTNQ86VV8 AC020907.5-201ENST00000624372 1936 ntBASIC17.56■□□□□ 0.4
RTTNQ86VV8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTTNQ86VV8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTTNQ86VV8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
RTTNQ86VV8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTTNQ86VV8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RTTNQ86VV8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
RTTNQ86VV8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTTNQ86VV8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RTTNQ86VV8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.55■□□□□ 0.4
RTTNQ86VV8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RTTNQ86VV8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
RTTNQ86VV8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.55■□□□□ 0.4
RTTNQ86VV8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.55■□□□□ 0.4
RTTNQ86VV8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
RTTNQ86VV8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RTTNQ86VV8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.55■□□□□ 0.4
RTTNQ86VV8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RTTNQ86VV8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.55■□□□□ 0.4
RTTNQ86VV8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.55■□□□□ 0.4
RTTNQ86VV8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTTNQ86VV8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RTTNQ86VV8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.55■□□□□ 0.4
RTTNQ86VV8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RTTNQ86VV8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTTNQ86VV8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RTTNQ86VV8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTTNQ86VV8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.54■□□□□ 0.4
RTTNQ86VV8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTTNQ86VV8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTTNQ86VV8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.54■□□□□ 0.4
RTTNQ86VV8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RTTNQ86VV8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
RTTNQ86VV8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.54■□□□□ 0.4
RTTNQ86VV8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.54■□□□□ 0.4
RTTNQ86VV8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
RTTNQ86VV8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.54■□□□□ 0.4
RTTNQ86VV8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTTNQ86VV8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RTTNQ86VV8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.54■□□□□ 0.4
RTTNQ86VV8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RTTNQ86VV8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTTNQ86VV8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTTNQ86VV8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTTNQ86VV8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTTNQ86VV8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RTTNQ86VV8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTTNQ86VV8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.53■□□□□ 0.4
RTTNQ86VV8 PGM5P4-201ENST00000421970 445 ntBASIC17.53■□□□□ 0.4
RTTNQ86VV8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.53■□□□□ 0.4
RTTNQ86VV8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.53■□□□□ 0.4
RTTNQ86VV8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.53■□□□□ 0.4
RTTNQ86VV8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.53■□□□□ 0.4
RTTNQ86VV8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.53■□□□□ 0.4
RTTNQ86VV8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTTNQ86VV8 UNC93B4-201ENST00000505679 747 ntBASIC17.53■□□□□ 0.4
RTTNQ86VV8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTTNQ86VV8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.53■□□□□ 0.4
RTTNQ86VV8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTTNQ86VV8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.53■□□□□ 0.4
RTTNQ86VV8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTTNQ86VV8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.53■□□□□ 0.4
RTTNQ86VV8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTTNQ86VV8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTTNQ86VV8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.53■□□□□ 0.4
RTTNQ86VV8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTTNQ86VV8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
RTTNQ86VV8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.53■□□□□ 0.4
RTTNQ86VV8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTTNQ86VV8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTTNQ86VV8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTTNQ86VV8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTTNQ86VV8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTTNQ86VV8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RTTNQ86VV8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms