Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 CKBP1-201ENST00000565489 1086 ntBASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 AC092647.4-201ENST00000457211 535 ntBASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.81■□□□□ 0.6
ZFHX4Q86UP3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 FAM220CP-201ENST00000395253 831 ntBASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZFHX4Q86UP3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 UNC93B7-201ENST00000509439 705 ntBASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 AL138966.2-201ENST00000621997 464 ntBASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZFHX4Q86UP3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 HLA-J-202ENST00000469281 1241 ntBASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 AC026271.3-201ENST00000571884 352 ntBASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZFHX4Q86UP3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZFHX4Q86UP3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZFHX4Q86UP3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.77■□□□□ 0.6
ZFHX4Q86UP3 AC106795.1-205ENST00000512851 1056 ntBASIC18.77■□□□□ 0.6
ZFHX4Q86UP3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
ZFHX4Q86UP3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZFHX4Q86UP3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZFHX4Q86UP3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZFHX4Q86UP3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZFHX4Q86UP3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZFHX4Q86UP3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.77■□□□□ 0.6
ZFHX4Q86UP3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.77■□□□□ 0.6
ZFHX4Q86UP3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZFHX4Q86UP3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZFHX4Q86UP3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZFHX4Q86UP3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZFHX4Q86UP3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.77■□□□□ 0.59
ZFHX4Q86UP3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ZFHX4Q86UP3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.77■□□□□ 0.59
ZFHX4Q86UP3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.77■□□□□ 0.59
ZFHX4Q86UP3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
ZFHX4Q86UP3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms