Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 DBI-210ENST00000542275 757 ntTSL 5 BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 KRT18P61-201ENST00000585825 1298 ntBASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 AC013268.1-206ENST00000638368 961 ntBASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 AC112229.1-201ENST00000639295 961 ntBASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 AFG3L1P-217ENST00000557444 2447 ntBASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 TCF3P1-201ENST00000423021 1937 ntBASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL55Q7Z7F7 AC087633.2-202ENST00000565166 1439 ntBASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 AC137761.2-201ENST00000561729 223 ntBASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 AC145350.3-201ENST00000569033 163 ntBASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 AL356652.1-201ENST00000615962 565 ntBASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL55Q7Z7F7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL55Q7Z7F7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms