Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
RAI1Q7Z5J4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAI1Q7Z5J4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAI1Q7Z5J4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAI1Q7Z5J4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
RAI1Q7Z5J4 NIFKP9-201ENST00000419265 221 ntBASIC17.08■□□□□ 0.33
RAI1Q7Z5J4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAI1Q7Z5J4 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.08■□□□□ 0.33
RAI1Q7Z5J4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAI1Q7Z5J4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.08■□□□□ 0.32
RAI1Q7Z5J4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAI1Q7Z5J4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAI1Q7Z5J4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAI1Q7Z5J4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RAI1Q7Z5J4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAI1Q7Z5J4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAI1Q7Z5J4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAI1Q7Z5J4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.08■□□□□ 0.32
RAI1Q7Z5J4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAI1Q7Z5J4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 AC079598.2-202ENST00000546624 1451 ntBASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 AL121603.2-201ENST00000557373 2117 ntBASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 AC121338.2-201ENST00000622535 1744 ntBASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 FAM197Y1-201ENST00000421178 764 ntBASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 RBM17P1-201ENST00000453646 1190 ntBASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 AC116562.2-201ENST00000507042 360 ntBASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI1Q7Z5J4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 AL390955.1-201ENST00000428694 934 ntBASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 KRT16P1-201ENST00000399124 1418 ntBASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 AL031963.3-201ENST00000606441 850 ntBASIC17.06■□□□□ 0.32
RAI1Q7Z5J4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 UNC93B2-201ENST00000285383 730 ntBASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 AC073314.1-201ENST00000568729 2216 ntBASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAI1Q7Z5J4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAI1Q7Z5J4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms