Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 UNC93B5-201ENST00000530315 699 ntBASIC18.65■□□□□ 0.58
RTL4Q6ZR62 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 ESRRAP1-201ENST00000400596 1257 ntBASIC18.64■□□□□ 0.57
RTL4Q6ZR62 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RTL4Q6ZR62 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 PNMA6B-201ENST00000538162 1200 ntBASIC18.63■□□□□ 0.57
RTL4Q6ZR62 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 KRT8P36-201ENST00000489121 1440 ntBASIC18.63■□□□□ 0.57
RTL4Q6ZR62 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RTL4Q6ZR62 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 AC138932.1-201ENST00000534164 6830 ntBASIC18.62■□□□□ 0.57
RTL4Q6ZR62 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL4Q6ZR62 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL4Q6ZR62 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL4Q6ZR62 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL4Q6ZR62 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.61■□□□□ 0.57
RTL4Q6ZR62 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL4Q6ZR62 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL4Q6ZR62 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL4Q6ZR62 AC026366.1-201ENST00000488803 879 ntBASIC18.61■□□□□ 0.57
RTL4Q6ZR62 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms