Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CD109Q6YHK3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
CD109Q6YHK3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CD109Q6YHK3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC30.56■■■□□ 2.48
CD109Q6YHK3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC30.56■■■□□ 2.48
CD109Q6YHK3 C1orf229-201ENST00000623686 2258 ntBASIC30.56■■■□□ 2.48
CD109Q6YHK3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC30.56■■■□□ 2.48
CD109Q6YHK3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC30.56■■■□□ 2.48
CD109Q6YHK3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CD109Q6YHK3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
CD109Q6YHK3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC30.56■■■□□ 2.48
CD109Q6YHK3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CD109Q6YHK3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CD109Q6YHK3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC30.56■■■□□ 2.48
CD109Q6YHK3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CD109Q6YHK3 AC008040.2-201ENST00000461049 708 ntBASIC30.56■■■□□ 2.48
CD109Q6YHK3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC30.56■■■□□ 2.48
CD109Q6YHK3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CD109Q6YHK3 AC092338.2-201ENST00000568827 1415 ntBASIC30.55■■■□□ 2.48
CD109Q6YHK3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC30.55■■■□□ 2.48
CD109Q6YHK3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CD109Q6YHK3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
CD109Q6YHK3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CD109Q6YHK3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CD109Q6YHK3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CD109Q6YHK3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CD109Q6YHK3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CD109Q6YHK3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC30.55■■■□□ 2.48
CD109Q6YHK3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC30.55■■■□□ 2.48
CD109Q6YHK3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC30.55■■■□□ 2.48
CD109Q6YHK3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CD109Q6YHK3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
CD109Q6YHK3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
CD109Q6YHK3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CD109Q6YHK3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CD109Q6YHK3 KRT8P20-201ENST00000423953 1409 ntBASIC30.54■■■□□ 2.48
CD109Q6YHK3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
CD109Q6YHK3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
CD109Q6YHK3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CD109Q6YHK3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CD109Q6YHK3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CD109Q6YHK3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC30.54■■■□□ 2.48
CD109Q6YHK3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC30.54■■■□□ 2.48
CD109Q6YHK3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC30.54■■■□□ 2.48
CD109Q6YHK3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CD109Q6YHK3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
CD109Q6YHK3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CD109Q6YHK3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC30.53■■■□□ 2.48
CD109Q6YHK3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CD109Q6YHK3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC30.53■■■□□ 2.48
CD109Q6YHK3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CD109Q6YHK3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC30.53■■■□□ 2.48
CD109Q6YHK3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC30.53■■■□□ 2.48
CD109Q6YHK3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC30.53■■■□□ 2.48
CD109Q6YHK3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC30.53■■■□□ 2.48
CD109Q6YHK3 AC008622.2-201ENST00000617006 1229 ntBASIC30.53■■■□□ 2.48
CD109Q6YHK3 AC011298.2-201ENST00000617989 482 ntBASIC30.53■■■□□ 2.48
CD109Q6YHK3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CD109Q6YHK3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CD109Q6YHK3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC30.53■■■□□ 2.48
CD109Q6YHK3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CD109Q6YHK3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CD109Q6YHK3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CD109Q6YHK3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CD109Q6YHK3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CD109Q6YHK3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC30.52■■■□□ 2.48
CD109Q6YHK3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC30.52■■■□□ 2.48
CD109Q6YHK3 AC246785.2-201ENST00000432512 513 ntBASIC30.52■■■□□ 2.48
CD109Q6YHK3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CD109Q6YHK3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CD109Q6YHK3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
CD109Q6YHK3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
CD109Q6YHK3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CD109Q6YHK3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC30.51■■■□□ 2.47
CD109Q6YHK3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC30.51■■■□□ 2.47
CD109Q6YHK3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC30.51■■■□□ 2.47
CD109Q6YHK3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC30.51■■■□□ 2.47
CD109Q6YHK3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC30.51■■■□□ 2.47
CD109Q6YHK3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC30.51■■■□□ 2.47
CD109Q6YHK3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CD109Q6YHK3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC30.51■■■□□ 2.47
CD109Q6YHK3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC30.51■■■□□ 2.47
CD109Q6YHK3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC30.51■■■□□ 2.47
CD109Q6YHK3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CD109Q6YHK3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC30.5■■■□□ 2.47
CD109Q6YHK3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC30.5■■■□□ 2.47
CD109Q6YHK3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC30.5■■■□□ 2.47
CD109Q6YHK3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC30.5■■■□□ 2.47
CD109Q6YHK3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC30.5■■■□□ 2.47
CD109Q6YHK3 KRT18P16-201ENST00000510337 1294 ntBASIC30.5■■■□□ 2.47
CD109Q6YHK3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CD109Q6YHK3 AL441883.1-201ENST00000566170 1045 ntBASIC30.5■■■□□ 2.47
CD109Q6YHK3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CD109Q6YHK3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC30.5■■■□□ 2.47
CD109Q6YHK3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC30.5■■■□□ 2.47
CD109Q6YHK3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC30.5■■■□□ 2.47
CD109Q6YHK3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CD109Q6YHK3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC30.5■■■□□ 2.47
CD109Q6YHK3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CD109Q6YHK3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms