Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC38Q5VT99 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRC38Q5VT99 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC38Q5VT99 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC38Q5VT99 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC38Q5VT99 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC38Q5VT99 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC38Q5VT99 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC38Q5VT99 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.71■□□□□ 0.91
LRRC38Q5VT99 LSM12P1-201ENST00000411836 588 ntBASIC20.71■□□□□ 0.91
LRRC38Q5VT99 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.71■□□□□ 0.91
LRRC38Q5VT99 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.71■□□□□ 0.91
LRRC38Q5VT99 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.71■□□□□ 0.91
LRRC38Q5VT99 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC38Q5VT99 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LRRC38Q5VT99 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.7■□□□□ 0.91
LRRC38Q5VT99 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 AF201337.1-201ENST00000520239 748 ntBASIC20.7■□□□□ 0.9
LRRC38Q5VT99 RAP2CP1-201ENST00000605103 478 ntBASIC20.7■□□□□ 0.9
LRRC38Q5VT99 IKBKGP1-201ENST00000612193 1073 ntBASIC20.7■□□□□ 0.9
LRRC38Q5VT99 AL050303.2-201ENST00000619798 666 ntBASIC20.7■□□□□ 0.9
LRRC38Q5VT99 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 PHGDH-210ENST00000641115 1638 ntBASIC20.7■□□□□ 0.9
LRRC38Q5VT99 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC38Q5VT99 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LRRC38Q5VT99 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC38Q5VT99 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC38Q5VT99 AC116562.4-201ENST00000641316 2276 ntBASIC20.69■□□□□ 0.9
LRRC38Q5VT99 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.69■□□□□ 0.9
LRRC38Q5VT99 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRC38Q5VT99 AC026185.1-201ENST00000445748 174 ntBASIC20.69■□□□□ 0.9
LRRC38Q5VT99 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.69■□□□□ 0.9
LRRC38Q5VT99 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC38Q5VT99 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC38Q5VT99 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC38Q5VT99 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LRRC38Q5VT99 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC38Q5VT99 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC38Q5VT99 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC38Q5VT99 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC38Q5VT99 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC38Q5VT99 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC38Q5VT99 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC38Q5VT99 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC38Q5VT99 GPX1P1-201ENST00000388829 606 ntBASIC20.68■□□□□ 0.9
LRRC38Q5VT99 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC38Q5VT99 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC38Q5VT99 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC38Q5VT99 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.68■□□□□ 0.9
LRRC38Q5VT99 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.68■□□□□ 0.9
LRRC38Q5VT99 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC38Q5VT99 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC38Q5VT99 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC38Q5VT99 MKRN4P-201ENST00000444706 1521 ntBASIC20.68■□□□□ 0.9
LRRC38Q5VT99 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms