Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
VARS2Q5ST30 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.17■□□□□ 0.98
VARS2Q5ST30 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VARS2Q5ST30 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VARS2Q5ST30 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VARS2Q5ST30 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.17■□□□□ 0.98
VARS2Q5ST30 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VARS2Q5ST30 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VARS2Q5ST30 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VARS2Q5ST30 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VARS2Q5ST30 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VARS2Q5ST30 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VARS2Q5ST30 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VARS2Q5ST30 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VARS2Q5ST30 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VARS2Q5ST30 AL353807.1-201ENST00000427475 662 ntBASIC21.16■□□□□ 0.98
VARS2Q5ST30 BX088651.1-201ENST00000540551 451 ntBASIC21.16■□□□□ 0.98
VARS2Q5ST30 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.16■□□□□ 0.98
VARS2Q5ST30 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.16■□□□□ 0.98
VARS2Q5ST30 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.16■□□□□ 0.98
VARS2Q5ST30 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.16■□□□□ 0.98
VARS2Q5ST30 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.16■□□□□ 0.98
VARS2Q5ST30 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.16■□□□□ 0.98
VARS2Q5ST30 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VARS2Q5ST30 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VARS2Q5ST30 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.16■□□□□ 0.98
VARS2Q5ST30 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VARS2Q5ST30 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VARS2Q5ST30 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.15■□□□□ 0.98
VARS2Q5ST30 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
VARS2Q5ST30 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VARS2Q5ST30 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.15■□□□□ 0.98
VARS2Q5ST30 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.15■□□□□ 0.98
VARS2Q5ST30 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VARS2Q5ST30 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VARS2Q5ST30 TSPY15P-201ENST00000457163 923 ntBASIC21.15■□□□□ 0.98
VARS2Q5ST30 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.15■□□□□ 0.98
VARS2Q5ST30 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VARS2Q5ST30 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.15■□□□□ 0.98
VARS2Q5ST30 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VARS2Q5ST30 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VARS2Q5ST30 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VARS2Q5ST30 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VARS2Q5ST30 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VARS2Q5ST30 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.14■□□□□ 0.98
VARS2Q5ST30 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VARS2Q5ST30 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
VARS2Q5ST30 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
VARS2Q5ST30 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
VARS2Q5ST30 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
VARS2Q5ST30 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.14■□□□□ 0.97
VARS2Q5ST30 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.14■□□□□ 0.97
VARS2Q5ST30 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.14■□□□□ 0.97
VARS2Q5ST30 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VARS2Q5ST30 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VARS2Q5ST30 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.14■□□□□ 0.97
VARS2Q5ST30 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.14■□□□□ 0.97
VARS2Q5ST30 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VARS2Q5ST30 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.13■□□□□ 0.97
VARS2Q5ST30 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VARS2Q5ST30 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VARS2Q5ST30 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VARS2Q5ST30 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VARS2Q5ST30 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
VARS2Q5ST30 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
VARS2Q5ST30 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
VARS2Q5ST30 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VARS2Q5ST30 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.13■□□□□ 0.97
VARS2Q5ST30 CD177P1-201ENST00000606252 935 ntBASIC21.13■□□□□ 0.97
VARS2Q5ST30 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.13■□□□□ 0.97
VARS2Q5ST30 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.13■□□□□ 0.97
VARS2Q5ST30 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.13■□□□□ 0.97
VARS2Q5ST30 AC007375.3-201ENST00000600936 2314 ntBASIC21.13■□□□□ 0.97
VARS2Q5ST30 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VARS2Q5ST30 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
VARS2Q5ST30 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VARS2Q5ST30 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.13■□□□□ 0.97
VARS2Q5ST30 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VARS2Q5ST30 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VARS2Q5ST30 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
VARS2Q5ST30 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
VARS2Q5ST30 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
VARS2Q5ST30 KRT16P6-202ENST00000425692 1426 ntBASIC21.12■□□□□ 0.97
VARS2Q5ST30 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
VARS2Q5ST30 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VARS2Q5ST30 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VARS2Q5ST30 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.12■□□□□ 0.97
VARS2Q5ST30 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.12■□□□□ 0.97
VARS2Q5ST30 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.12■□□□□ 0.97
VARS2Q5ST30 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.12■□□□□ 0.97
VARS2Q5ST30 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.12■□□□□ 0.97
VARS2Q5ST30 AL355075.4-201ENST00000554988 638 ntBASIC21.12■□□□□ 0.97
VARS2Q5ST30 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VARS2Q5ST30 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.12■□□□□ 0.97
VARS2Q5ST30 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.12■□□□□ 0.97
VARS2Q5ST30 AC026471.5-201ENST00000615068 467 ntBASIC21.12■□□□□ 0.97
VARS2Q5ST30 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.12■□□□□ 0.97
VARS2Q5ST30 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VARS2Q5ST30 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
VARS2Q5ST30 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms