Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 MKRN4P-201ENST00000444706 1521 ntBASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 KRT8P20-201ENST00000423953 1409 ntBASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP13A4Q4VNC1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 LSM12P1-201ENST00000411836 588 ntBASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 BX276092.2-201ENST00000417668 665 ntBASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A4Q4VNC1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP13A4Q4VNC1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.77■□□□□ 0.91
ATP13A4Q4VNC1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP13A4Q4VNC1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.77■□□□□ 0.91
ATP13A4Q4VNC1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 AC116562.4-201ENST00000641316 2276 ntBASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.76■□□□□ 0.91
ATP13A4Q4VNC1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 AC083906.2-201ENST00000511578 360 ntBASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A4Q4VNC1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 TREX1-205ENST00000625293 1783 ntBASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A4Q4VNC1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms