Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RFX4Q33E94 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX4Q33E94 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX4Q33E94 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.5■□□□□ 0.55
RFX4Q33E94 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
RFX4Q33E94 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX4Q33E94 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX4Q33E94 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX4Q33E94 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
RFX4Q33E94 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.5■□□□□ 0.55
RFX4Q33E94 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
RFX4Q33E94 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX4Q33E94 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX4Q33E94 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RFX4Q33E94 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX4Q33E94 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.5■□□□□ 0.55
RFX4Q33E94 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.5■□□□□ 0.55
RFX4Q33E94 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.5■□□□□ 0.55
RFX4Q33E94 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.5■□□□□ 0.55
RFX4Q33E94 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX4Q33E94 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX4Q33E94 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX4Q33E94 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.5■□□□□ 0.55
RFX4Q33E94 AC120498.9-201ENST00000339021 3867 ntBASIC18.49■□□□□ 0.55
RFX4Q33E94 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX4Q33E94 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX4Q33E94 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX4Q33E94 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX4Q33E94 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX4Q33E94 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX4Q33E94 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX4Q33E94 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
RFX4Q33E94 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX4Q33E94 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX4Q33E94 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX4Q33E94 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.49■□□□□ 0.55
RFX4Q33E94 AC005837.3-201ENST00000612163 286 ntBASIC18.49■□□□□ 0.55
RFX4Q33E94 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.49■□□□□ 0.55
RFX4Q33E94 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX4Q33E94 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX4Q33E94 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX4Q33E94 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RFX4Q33E94 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RFX4Q33E94 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX4Q33E94 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RFX4Q33E94 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX4Q33E94 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX4Q33E94 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RFX4Q33E94 LINC02228-203ENST00000641970 1355 ntBASIC18.48■□□□□ 0.55
RFX4Q33E94 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX4Q33E94 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RFX4Q33E94 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX4Q33E94 DUX4L2-201ENST00000561772 1275 ntBASIC18.48■□□□□ 0.55
RFX4Q33E94 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.48■□□□□ 0.55
RFX4Q33E94 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
RFX4Q33E94 DUX4L6-201ENST00000626483 1275 ntBASIC18.48■□□□□ 0.55
RFX4Q33E94 DUX4L1-201ENST00000627662 1275 ntBASIC18.48■□□□□ 0.55
RFX4Q33E94 DUX4L8-201ENST00000629013 1275 ntBASIC18.48■□□□□ 0.55
RFX4Q33E94 DUX4L3-201ENST00000630187 1275 ntBASIC18.48■□□□□ 0.55
RFX4Q33E94 DUX4L7-201ENST00000630678 1275 ntBASIC18.48■□□□□ 0.55
RFX4Q33E94 DUX4L5-201ENST00000630834 1275 ntBASIC18.48■□□□□ 0.55
RFX4Q33E94 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX4Q33E94 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX4Q33E94 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX4Q33E94 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX4Q33E94 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX4Q33E94 KRT8P36-201ENST00000489121 1440 ntBASIC18.48■□□□□ 0.55
RFX4Q33E94 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.48■□□□□ 0.55
RFX4Q33E94 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.48■□□□□ 0.55
RFX4Q33E94 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
RFX4Q33E94 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX4Q33E94 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.47■□□□□ 0.55
RFX4Q33E94 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX4Q33E94 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX4Q33E94 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFX4Q33E94 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX4Q33E94 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
RFX4Q33E94 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.47■□□□□ 0.55
RFX4Q33E94 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.47■□□□□ 0.55
RFX4Q33E94 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.47■□□□□ 0.55
RFX4Q33E94 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFX4Q33E94 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX4Q33E94 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX4Q33E94 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX4Q33E94 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RFX4Q33E94 AC105265.2-201ENST00000467189 838 ntBASIC18.47■□□□□ 0.55
RFX4Q33E94 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX4Q33E94 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFX4Q33E94 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX4Q33E94 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFX4Q33E94 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFX4Q33E94 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX4Q33E94 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX4Q33E94 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX4Q33E94 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX4Q33E94 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX4Q33E94 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX4Q33E94 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.46■□□□□ 0.55
RFX4Q33E94 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RFX4Q33E94 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms