Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PRAMEP78395 AFG3L1P-217ENST00000557444 2447 ntBASIC20.06■□□□□ 0.8
PRAMEP78395 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEP78395 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PRAMEP78395 PTBP1P-201ENST00000554374 1601 ntBASIC20.06■□□□□ 0.8
PRAMEP78395 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.06■□□□□ 0.8
PRAMEP78395 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEP78395 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEP78395 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEP78395 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.06■□□□□ 0.8
PRAMEP78395 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEP78395 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.06■□□□□ 0.8
PRAMEP78395 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.06■□□□□ 0.8
PRAMEP78395 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEP78395 C2orf69P4-201ENST00000565394 541 ntBASIC20.06■□□□□ 0.8
PRAMEP78395 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEP78395 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEP78395 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEP78395 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEP78395 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEP78395 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEP78395 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.06■□□□□ 0.8
PRAMEP78395 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PRAMEP78395 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.06■□□□□ 0.8
PRAMEP78395 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEP78395 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEP78395 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.05■□□□□ 0.8
PRAMEP78395 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.05■□□□□ 0.8
PRAMEP78395 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PRAMEP78395 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEP78395 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PRAMEP78395 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEP78395 KRT8P17-201ENST00000453110 1448 ntBASIC20.05■□□□□ 0.8
PRAMEP78395 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEP78395 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEP78395 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.05■□□□□ 0.8
PRAMEP78395 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.05■□□□□ 0.8
PRAMEP78395 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.05■□□□□ 0.8
PRAMEP78395 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.05■□□□□ 0.8
PRAMEP78395 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.05■□□□□ 0.8
PRAMEP78395 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.05■□□□□ 0.8
PRAMEP78395 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.05■□□□□ 0.8
PRAMEP78395 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEP78395 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEP78395 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEP78395 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEP78395 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEP78395 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.05■□□□□ 0.8
PRAMEP78395 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEP78395 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PRAMEP78395 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PRAMEP78395 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
PRAMEP78395 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.04■□□□□ 0.8
PRAMEP78395 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.04■□□□□ 0.8
PRAMEP78395 KRT8P20-201ENST00000423953 1409 ntBASIC20.04■□□□□ 0.8
PRAMEP78395 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEP78395 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEP78395 AL691432.2-201ENST00000607222 2038 ntBASIC20.04■□□□□ 0.8
PRAMEP78395 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.04■□□□□ 0.8
PRAMEP78395 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PRAMEP78395 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.04■□□□□ 0.8
PRAMEP78395 BX276092.2-201ENST00000417668 665 ntBASIC20.04■□□□□ 0.8
PRAMEP78395 AL031963.3-201ENST00000606441 850 ntBASIC20.04■□□□□ 0.8
PRAMEP78395 AL121832.2-201ENST00000610979 668 ntBASIC20.04■□□□□ 0.8
PRAMEP78395 AC092666.2-201ENST00000613287 246 ntBASIC20.04■□□□□ 0.8
PRAMEP78395 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEP78395 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PRAMEP78395 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.04■□□□□ 0.8
PRAMEP78395 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEP78395 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PRAMEP78395 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.04■□□□□ 0.8
PRAMEP78395 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PRAMEP78395 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PRAMEP78395 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PRAMEP78395 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEP78395 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEP78395 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEP78395 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEP78395 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEP78395 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PRAMEP78395 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PRAMEP78395 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEP78395 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEP78395 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.03■□□□□ 0.8
PRAMEP78395 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
PRAMEP78395 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.03■□□□□ 0.8
PRAMEP78395 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.03■□□□□ 0.8
PRAMEP78395 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.03■□□□□ 0.8
PRAMEP78395 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEP78395 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEP78395 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.03■□□□□ 0.8
PRAMEP78395 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEP78395 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEP78395 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEP78395 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEP78395 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEP78395 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEP78395 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PRAMEP78395 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.03■□□□□ 0.8
PRAMEP78395 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms