Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
YBX1P67809 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.45■□□□□ 0.7
YBX1P67809 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.45■□□□□ 0.7
YBX1P67809 AL158211.5-201ENST00000623583 2518 ntBASIC19.45■□□□□ 0.7
YBX1P67809 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
YBX1P67809 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
YBX1P67809 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
YBX1P67809 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.44■□□□□ 0.7
YBX1P67809 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.44■□□□□ 0.7
YBX1P67809 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.44■□□□□ 0.7
YBX1P67809 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.44■□□□□ 0.7
YBX1P67809 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.44■□□□□ 0.7
YBX1P67809 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
YBX1P67809 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
YBX1P67809 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
YBX1P67809 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
YBX1P67809 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
YBX1P67809 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
YBX1P67809 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
YBX1P67809 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
YBX1P67809 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
YBX1P67809 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
YBX1P67809 AC116562.4-201ENST00000641316 2276 ntBASIC19.43■□□□□ 0.7
YBX1P67809 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.43■□□□□ 0.7
YBX1P67809 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
YBX1P67809 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.43■□□□□ 0.7
YBX1P67809 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.43■□□□□ 0.7
YBX1P67809 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.43■□□□□ 0.7
YBX1P67809 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.43■□□□□ 0.7
YBX1P67809 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.43■□□□□ 0.7
YBX1P67809 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.43■□□□□ 0.7
YBX1P67809 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
YBX1P67809 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
YBX1P67809 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
YBX1P67809 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
YBX1P67809 PKD1P6-201ENST00000343738 4769 ntBASIC19.43■□□□□ 0.7
YBX1P67809 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
YBX1P67809 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
YBX1P67809 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
YBX1P67809 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
YBX1P67809 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.42■□□□□ 0.7
YBX1P67809 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YBX1P67809 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YBX1P67809 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
YBX1P67809 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YBX1P67809 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.42■□□□□ 0.7
YBX1P67809 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
YBX1P67809 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YBX1P67809 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YBX1P67809 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
YBX1P67809 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YBX1P67809 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.42■□□□□ 0.7
YBX1P67809 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.42■□□□□ 0.7
YBX1P67809 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YBX1P67809 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YBX1P67809 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.42■□□□□ 0.7
YBX1P67809 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
YBX1P67809 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YBX1P67809 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.42■□□□□ 0.7
YBX1P67809 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
YBX1P67809 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.41■□□□□ 0.7
YBX1P67809 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
YBX1P67809 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
YBX1P67809 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YBX1P67809 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.41■□□□□ 0.7
YBX1P67809 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YBX1P67809 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YBX1P67809 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YBX1P67809 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YBX1P67809 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YBX1P67809 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.41■□□□□ 0.7
YBX1P67809 KRT18P6-201ENST00000555540 1265 ntBASIC19.41■□□□□ 0.7
YBX1P67809 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.41■□□□□ 0.7
YBX1P67809 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YBX1P67809 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
YBX1P67809 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
YBX1P67809 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
YBX1P67809 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
YBX1P67809 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
YBX1P67809 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YBX1P67809 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms