Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.99■□□□□ 0.95
USP46P62068 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.99■□□□□ 0.95
USP46P62068 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP46P62068 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.98■□□□□ 0.95
USP46P62068 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.98■□□□□ 0.95
USP46P62068 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP46P62068 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
USP46P62068 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP46P62068 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
USP46P62068 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP46P62068 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP46P62068 HLA-G-202ENST00000376815 851 ntBASIC20.98■□□□□ 0.95
USP46P62068 HLA-G-203ENST00000376818 1127 ntBASIC20.98■□□□□ 0.95
USP46P62068 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.98■□□□□ 0.95
USP46P62068 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.98■□□□□ 0.95
USP46P62068 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
USP46P62068 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.98■□□□□ 0.95
USP46P62068 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
USP46P62068 Z99916.2-201ENST00000604037 246 ntBASIC20.98■□□□□ 0.95
USP46P62068 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.98■□□□□ 0.95
USP46P62068 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP46P62068 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.98■□□□□ 0.95
USP46P62068 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.98■□□□□ 0.95
USP46P62068 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.98■□□□□ 0.95
USP46P62068 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.98■□□□□ 0.95
USP46P62068 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.97■□□□□ 0.95
USP46P62068 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP46P62068 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
USP46P62068 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.97■□□□□ 0.95
USP46P62068 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP46P62068 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.97■□□□□ 0.95
USP46P62068 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.97■□□□□ 0.95
USP46P62068 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.97■□□□□ 0.95
USP46P62068 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.97■□□□□ 0.95
USP46P62068 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.97■□□□□ 0.95
USP46P62068 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP46P62068 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP46P62068 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP46P62068 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP46P62068 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP46P62068 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
USP46P62068 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
USP46P62068 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP46P62068 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP46P62068 SMG8-203ENST00000578922 2178 ntBASIC20.96■□□□□ 0.95
USP46P62068 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP46P62068 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.96■□□□□ 0.95
USP46P62068 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
USP46P62068 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.96■□□□□ 0.95
USP46P62068 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.96■□□□□ 0.95
USP46P62068 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP46P62068 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.96■□□□□ 0.95
USP46P62068 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.96■□□□□ 0.95
USP46P62068 AL121829.2-201ENST00000620908 328 ntBASIC20.96■□□□□ 0.95
USP46P62068 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.96■□□□□ 0.95
USP46P62068 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.96■□□□□ 0.95
USP46P62068 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP46P62068 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP46P62068 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.96■□□□□ 0.95
USP46P62068 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
USP46P62068 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP46P62068 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP46P62068 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.95■□□□□ 0.95
USP46P62068 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP46P62068 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP46P62068 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP46P62068 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
USP46P62068 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP46P62068 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP46P62068 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP46P62068 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP46P62068 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP46P62068 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
USP46P62068 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP46P62068 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.95■□□□□ 0.94
USP46P62068 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
USP46P62068 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
USP46P62068 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
USP46P62068 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP46P62068 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.95■□□□□ 0.94
USP46P62068 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP46P62068 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
USP46P62068 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP46P62068 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP46P62068 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.94■□□□□ 0.94
USP46P62068 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP46P62068 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP46P62068 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP46P62068 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.94■□□□□ 0.94
USP46P62068 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP46P62068 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP46P62068 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.94■□□□□ 0.94
USP46P62068 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.94■□□□□ 0.94
USP46P62068 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.94■□□□□ 0.94
USP46P62068 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.94■□□□□ 0.94
USP46P62068 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.94■□□□□ 0.94
USP46P62068 AC110285.5-201ENST00000611501 352 ntBASIC20.94■□□□□ 0.94
USP46P62068 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP46P62068 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.94■□□□□ 0.94
USP46P62068 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms