Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CYP2T1P-201ENST00000432607 1285 ntBASIC17.39■□□□□ 0.37
SEC61A1P61619 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.39■□□□□ 0.37
SEC61A1P61619 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SEC61A1P61619 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SEC61A1P61619 AL121832.2-201ENST00000610979 668 ntBASIC17.39■□□□□ 0.37
SEC61A1P61619 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEC61A1P61619 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SEC61A1P61619 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.39■□□□□ 0.37
SEC61A1P61619 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEC61A1P61619 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.39■□□□□ 0.37
SEC61A1P61619 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEC61A1P61619 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEC61A1P61619 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.39■□□□□ 0.37
SEC61A1P61619 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SEC61A1P61619 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.39■□□□□ 0.37
SEC61A1P61619 RBM17P2-201ENST00000616397 1405 ntBASIC17.38■□□□□ 0.37
SEC61A1P61619 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC61A1P61619 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SEC61A1P61619 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.38■□□□□ 0.37
SEC61A1P61619 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.38■□□□□ 0.37
SEC61A1P61619 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
SEC61A1P61619 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC61A1P61619 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.38■□□□□ 0.37
SEC61A1P61619 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC61A1P61619 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SEC61A1P61619 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC61A1P61619 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC61A1P61619 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEC61A1P61619 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEC61A1P61619 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC61A1P61619 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEC61A1P61619 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.38■□□□□ 0.37
SEC61A1P61619 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.38■□□□□ 0.37
SEC61A1P61619 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.38■□□□□ 0.37
SEC61A1P61619 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.38■□□□□ 0.37
SEC61A1P61619 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC61A1P61619 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SEC61A1P61619 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.38■□□□□ 0.37
SEC61A1P61619 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC61A1P61619 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.38■□□□□ 0.37
SEC61A1P61619 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.38■□□□□ 0.37
SEC61A1P61619 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.38■□□□□ 0.37
SEC61A1P61619 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC61A1P61619 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC61A1P61619 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC61A1P61619 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.37■□□□□ 0.37
SEC61A1P61619 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC61A1P61619 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC61A1P61619 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC61A1P61619 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SEC61A1P61619 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC61A1P61619 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC61A1P61619 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.37■□□□□ 0.37
SEC61A1P61619 GUSBP6-202ENST00000438529 1198 ntBASIC17.37■□□□□ 0.37
SEC61A1P61619 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
SEC61A1P61619 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.37■□□□□ 0.37
SEC61A1P61619 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SEC61A1P61619 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.37■□□□□ 0.37
SEC61A1P61619 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.37■□□□□ 0.37
SEC61A1P61619 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.37■□□□□ 0.37
SEC61A1P61619 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC61A1P61619 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
SEC61A1P61619 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEC61A1P61619 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SEC61A1P61619 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SEC61A1P61619 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.36■□□□□ 0.37
SEC61A1P61619 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEC61A1P61619 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEC61A1P61619 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SEC61A1P61619 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SEC61A1P61619 TSPY6P-201ENST00000448518 926 ntBASIC17.36■□□□□ 0.37
SEC61A1P61619 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SEC61A1P61619 AC007322.4-201ENST00000509611 723 ntBASIC17.36■□□□□ 0.37
SEC61A1P61619 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.36■□□□□ 0.37
SEC61A1P61619 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.36■□□□□ 0.37
SEC61A1P61619 AC105036.2-201ENST00000569468 176 ntBASIC17.36■□□□□ 0.37
SEC61A1P61619 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEC61A1P61619 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.36■□□□□ 0.37
SEC61A1P61619 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEC61A1P61619 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEC61A1P61619 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.36■□□□□ 0.37
SEC61A1P61619 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEC61A1P61619 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SEC61A1P61619 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.36■□□□□ 0.37
SEC61A1P61619 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.35■□□□□ 0.37
SEC61A1P61619 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SEC61A1P61619 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
SEC61A1P61619 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.35■□□□□ 0.37
SEC61A1P61619 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SEC61A1P61619 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SEC61A1P61619 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.35■□□□□ 0.37
SEC61A1P61619 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.35■□□□□ 0.37
SEC61A1P61619 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms