Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC011270.2-201ENST00000624293 2550 ntBASIC16.17■□□□□ 0.18
SPCS3P61009 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS3P61009 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS3P61009 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS3P61009 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS3P61009 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.16■□□□□ 0.18
SPCS3P61009 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS3P61009 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SPCS3P61009 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS3P61009 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS3P61009 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SPCS3P61009 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS3P61009 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS3P61009 AC018445.3-201ENST00000624177 1945 ntBASIC16.16■□□□□ 0.18
SPCS3P61009 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.16■□□□□ 0.18
SPCS3P61009 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS3P61009 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS3P61009 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS3P61009 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS3P61009 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS3P61009 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.16■□□□□ 0.18
SPCS3P61009 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.16■□□□□ 0.18
SPCS3P61009 SLC7A5P1-201ENST00000568957 537 ntBASIC16.16■□□□□ 0.18
SPCS3P61009 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SPCS3P61009 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.16■□□□□ 0.18
SPCS3P61009 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS3P61009 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS3P61009 RBM17P2-201ENST00000616397 1405 ntBASIC16.16■□□□□ 0.18
SPCS3P61009 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.16■□□□□ 0.18
SPCS3P61009 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.16■□□□□ 0.18
SPCS3P61009 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.16■□□□□ 0.18
SPCS3P61009 AL691432.2-201ENST00000607222 2038 ntBASIC16.16■□□□□ 0.18
SPCS3P61009 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.16■□□□□ 0.18
SPCS3P61009 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.16■□□□□ 0.18
SPCS3P61009 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPCS3P61009 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPCS3P61009 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPCS3P61009 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SPCS3P61009 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPCS3P61009 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.15■□□□□ 0.18
SPCS3P61009 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPCS3P61009 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SPCS3P61009 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.15■□□□□ 0.18
SPCS3P61009 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.15■□□□□ 0.18
SPCS3P61009 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.15■□□□□ 0.18
SPCS3P61009 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.15■□□□□ 0.18
SPCS3P61009 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SPCS3P61009 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.15■□□□□ 0.18
SPCS3P61009 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPCS3P61009 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.15■□□□□ 0.18
SPCS3P61009 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPCS3P61009 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.15■□□□□ 0.18
SPCS3P61009 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.15■□□□□ 0.18
SPCS3P61009 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPCS3P61009 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.14■□□□□ 0.17
SPCS3P61009 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS3P61009 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS3P61009 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SPCS3P61009 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS3P61009 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS3P61009 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS3P61009 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.14■□□□□ 0.17
SPCS3P61009 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS3P61009 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS3P61009 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS3P61009 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS3P61009 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.14■□□□□ 0.17
SPCS3P61009 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SPCS3P61009 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS3P61009 PGM5P4-201ENST00000421970 445 ntBASIC16.14■□□□□ 0.17
SPCS3P61009 CDV3P1-201ENST00000471403 739 ntBASIC16.14■□□□□ 0.17
SPCS3P61009 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.14■□□□□ 0.17
SPCS3P61009 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.14■□□□□ 0.17
SPCS3P61009 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
SPCS3P61009 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.14■□□□□ 0.17
SPCS3P61009 AL139246.5-201ENST00000606645 996 ntBASIC16.14■□□□□ 0.17
SPCS3P61009 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SPCS3P61009 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS3P61009 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
SPCS3P61009 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.14■□□□□ 0.17
SPCS3P61009 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS3P61009 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.14■□□□□ 0.17
SPCS3P61009 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS3P61009 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS3P61009 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.14■□□□□ 0.17
SPCS3P61009 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.14■□□□□ 0.17
SPCS3P61009 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS3P61009 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS3P61009 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
SPCS3P61009 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS3P61009 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SPCS3P61009 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SPCS3P61009 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.13■□□□□ 0.17
SPCS3P61009 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SPCS3P61009 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.13■□□□□ 0.17
SPCS3P61009 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS3P61009 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SPCS3P61009 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.13■□□□□ 0.17
SPCS3P61009 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS3P61009 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms