Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 AC005181.1-201ENST00000604782 1256 ntBASIC20.57■□□□□ 0.88
EIF3EP60228 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EIF3EP60228 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.57■□□□□ 0.88
EIF3EP60228 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EIF3EP60228 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
EIF3EP60228 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
EIF3EP60228 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
EIF3EP60228 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EIF3EP60228 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.56■□□□□ 0.88
EIF3EP60228 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
EIF3EP60228 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3EP60228 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3EP60228 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3EP60228 KRT8P20-201ENST00000423953 1409 ntBASIC20.56■□□□□ 0.88
EIF3EP60228 KRT16P6-202ENST00000425692 1426 ntBASIC20.56■□□□□ 0.88
EIF3EP60228 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3EP60228 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3EP60228 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
EIF3EP60228 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3EP60228 AC093787.1-201ENST00000450396 207 ntBASIC20.56■□□□□ 0.88
EIF3EP60228 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.56■□□□□ 0.88
EIF3EP60228 AL589743.5-201ENST00000616611 1050 ntBASIC20.56■□□□□ 0.88
EIF3EP60228 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3EP60228 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.56■□□□□ 0.88
EIF3EP60228 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3EP60228 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3EP60228 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3EP60228 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
EIF3EP60228 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.56■□□□□ 0.88
EIF3EP60228 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.55■□□□□ 0.88
EIF3EP60228 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.55■□□□□ 0.88
EIF3EP60228 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
EIF3EP60228 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3EP60228 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3EP60228 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3EP60228 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3EP60228 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3EP60228 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3EP60228 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
EIF3EP60228 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.55■□□□□ 0.88
EIF3EP60228 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.55■□□□□ 0.88
EIF3EP60228 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3EP60228 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.55■□□□□ 0.88
EIF3EP60228 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3EP60228 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.55■□□□□ 0.88
EIF3EP60228 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.55■□□□□ 0.88
EIF3EP60228 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3EP60228 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3EP60228 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3EP60228 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3EP60228 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EIF3EP60228 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EIF3EP60228 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EIF3EP60228 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.54■□□□□ 0.88
EIF3EP60228 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
EIF3EP60228 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
EIF3EP60228 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EIF3EP60228 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EIF3EP60228 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EIF3EP60228 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.54■□□□□ 0.88
EIF3EP60228 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EIF3EP60228 AL512625.2-201ENST00000417533 625 ntBASIC20.54■□□□□ 0.88
EIF3EP60228 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.54■□□□□ 0.88
EIF3EP60228 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
EIF3EP60228 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
EIF3EP60228 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.54■□□□□ 0.88
EIF3EP60228 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.54■□□□□ 0.88
EIF3EP60228 AC092437.1-201ENST00000624794 1048 ntBASIC20.54■□□□□ 0.88
EIF3EP60228 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EIF3EP60228 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EIF3EP60228 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EIF3EP60228 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.54■□□□□ 0.88
EIF3EP60228 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
EIF3EP60228 KRT17P1-201ENST00000399211 1546 ntBASIC20.53■□□□□ 0.88
EIF3EP60228 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EIF3EP60228 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.53■□□□□ 0.88
EIF3EP60228 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.53■□□□□ 0.88
EIF3EP60228 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EIF3EP60228 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EIF3EP60228 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EIF3EP60228 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.53■□□□□ 0.88
EIF3EP60228 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.53■□□□□ 0.88
EIF3EP60228 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.53■□□□□ 0.88
EIF3EP60228 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EIF3EP60228 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.53■□□□□ 0.88
EIF3EP60228 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.53■□□□□ 0.88
EIF3EP60228 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
EIF3EP60228 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EIF3EP60228 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
EIF3EP60228 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EIF3EP60228 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
EIF3EP60228 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
EIF3EP60228 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.52■□□□□ 0.88
EIF3EP60228 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
EIF3EP60228 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
EIF3EP60228 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EIF3EP60228 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EIF3EP60228 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EIF3EP60228 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EIF3EP60228 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms