Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PER3P56645 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
PER3P56645 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
PER3P56645 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PER3P56645 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.38■□□□□ 0.53
PER3P56645 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PER3P56645 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PER3P56645 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PER3P56645 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PER3P56645 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PER3P56645 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.38■□□□□ 0.53
PER3P56645 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PER3P56645 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
PER3P56645 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.38■□□□□ 0.53
PER3P56645 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.38■□□□□ 0.53
PER3P56645 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.38■□□□□ 0.53
PER3P56645 AC233263.1-201ENST00000578059 224 ntBASIC18.38■□□□□ 0.53
PER3P56645 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
PER3P56645 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PER3P56645 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.38■□□□□ 0.53
PER3P56645 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.38■□□□□ 0.53
PER3P56645 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PER3P56645 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PER3P56645 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.38■□□□□ 0.53
PER3P56645 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PER3P56645 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PER3P56645 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PER3P56645 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.37■□□□□ 0.53
PER3P56645 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.37■□□□□ 0.53
PER3P56645 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PER3P56645 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.37■□□□□ 0.53
PER3P56645 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PER3P56645 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PER3P56645 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PER3P56645 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PER3P56645 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.37■□□□□ 0.53
PER3P56645 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PER3P56645 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PER3P56645 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.37■□□□□ 0.53
PER3P56645 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PER3P56645 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.37■□□□□ 0.53
PER3P56645 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.37■□□□□ 0.53
PER3P56645 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PER3P56645 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PER3P56645 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.37■□□□□ 0.53
PER3P56645 AC116050.2-201ENST00000612102 1779 ntBASIC18.37■□□□□ 0.53
PER3P56645 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PER3P56645 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
PER3P56645 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
PER3P56645 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.37■□□□□ 0.53
PER3P56645 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.37■□□□□ 0.53
PER3P56645 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PER3P56645 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PER3P56645 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PER3P56645 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PER3P56645 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
PER3P56645 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 LINC01006-201ENST00000333319 2292 ntBASIC18.36■□□□□ 0.53
PER3P56645 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.36■□□□□ 0.53
PER3P56645 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PER3P56645 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.36■□□□□ 0.53
PER3P56645 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.36■□□□□ 0.53
PER3P56645 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.36■□□□□ 0.53
PER3P56645 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.36■□□□□ 0.53
PER3P56645 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.36■□□□□ 0.53
PER3P56645 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.36■□□□□ 0.53
PER3P56645 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.36■□□□□ 0.53
PER3P56645 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PER3P56645 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
PER3P56645 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PER3P56645 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.35■□□□□ 0.53
PER3P56645 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PER3P56645 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.35■□□□□ 0.53
PER3P56645 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PER3P56645 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PER3P56645 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.35■□□□□ 0.53
PER3P56645 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PER3P56645 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PER3P56645 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PER3P56645 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PER3P56645 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.35■□□□□ 0.53
PER3P56645 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms