Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.21■□□□□ 0.51
CDH11P55287 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH11P55287 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH11P55287 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CDH11P55287 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH11P55287 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDH11P55287 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH11P55287 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH11P55287 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDH11P55287 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.5
CDH11P55287 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH11P55287 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH11P55287 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CDH11P55287 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH11P55287 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH11P55287 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDH11P55287 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH11P55287 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH11P55287 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CDH11P55287 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CDH11P55287 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH11P55287 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH11P55287 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH11P55287 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH11P55287 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH11P55287 SLC7A5P1-201ENST00000568957 537 ntBASIC18.2■□□□□ 0.5
CDH11P55287 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CDH11P55287 AC013268.1-206ENST00000638368 961 ntBASIC18.2■□□□□ 0.5
CDH11P55287 AC112229.1-201ENST00000639295 961 ntBASIC18.2■□□□□ 0.5
CDH11P55287 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH11P55287 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH11P55287 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH11P55287 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH11P55287 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH11P55287 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH11P55287 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH11P55287 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH11P55287 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH11P55287 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH11P55287 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH11P55287 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH11P55287 AL020996.1-203ENST00000536896 2307 ntBASIC18.2■□□□□ 0.5
CDH11P55287 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH11P55287 BX323043.1-201ENST00000641006 1765 ntBASIC18.19■□□□□ 0.5
CDH11P55287 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDH11P55287 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH11P55287 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH11P55287 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH11P55287 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH11P55287 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CDH11P55287 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH11P55287 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH11P55287 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH11P55287 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
CDH11P55287 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH11P55287 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH11P55287 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH11P55287 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH11P55287 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDH11P55287 SLC29A4P1-201ENST00000398760 971 ntBASIC18.19■□□□□ 0.5
CDH11P55287 CNN2P6-201ENST00000439038 900 ntBASIC18.19■□□□□ 0.5
CDH11P55287 AC083906.2-201ENST00000511578 360 ntBASIC18.19■□□□□ 0.5
CDH11P55287 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDH11P55287 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH11P55287 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH11P55287 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH11P55287 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH11P55287 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH11P55287 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH11P55287 AC138932.1-201ENST00000534164 6830 ntBASIC18.18■□□□□ 0.5
CDH11P55287 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH11P55287 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH11P55287 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH11P55287 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH11P55287 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.18■□□□□ 0.5
CDH11P55287 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH11P55287 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH11P55287 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.18■□□□□ 0.5
CDH11P55287 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH11P55287 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH11P55287 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CDH11P55287 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH11P55287 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDH11P55287 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH11P55287 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH11P55287 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH11P55287 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH11P55287 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH11P55287 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH11P55287 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH11P55287 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH11P55287 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH11P55287 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH11P55287 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH11P55287 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH11P55287 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH11P55287 TERF1P5-201ENST00000477545 1207 ntBASIC18.17■□□□□ 0.5
CDH11P55287 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH11P55287 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH11P55287 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms