Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NR1H2P55055 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NR1H2P55055 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NR1H2P55055 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.83■□□□□ 0.6
NR1H2P55055 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.83■□□□□ 0.6
NR1H2P55055 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.83■□□□□ 0.6
NR1H2P55055 KRT19P1-201ENST00000405746 1186 ntBASIC18.83■□□□□ 0.6
NR1H2P55055 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.83■□□□□ 0.6
NR1H2P55055 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.83■□□□□ 0.6
NR1H2P55055 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NR1H2P55055 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.83■□□□□ 0.6
NR1H2P55055 AC137761.2-201ENST00000561729 223 ntBASIC18.83■□□□□ 0.6
NR1H2P55055 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.83■□□□□ 0.6
NR1H2P55055 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.83■□□□□ 0.6
NR1H2P55055 AC145350.3-201ENST00000569033 163 ntBASIC18.83■□□□□ 0.6
NR1H2P55055 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.83■□□□□ 0.6
NR1H2P55055 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.83■□□□□ 0.6
NR1H2P55055 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NR1H2P55055 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.83■□□□□ 0.6
NR1H2P55055 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
NR1H2P55055 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NR1H2P55055 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NR1H2P55055 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NR1H2P55055 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NR1H2P55055 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NR1H2P55055 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.83■□□□□ 0.6
NR1H2P55055 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.83■□□□□ 0.6
NR1H2P55055 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H2P55055 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H2P55055 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H2P55055 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.82■□□□□ 0.6
NR1H2P55055 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H2P55055 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H2P55055 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H2P55055 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.82■□□□□ 0.6
NR1H2P55055 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H2P55055 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.82■□□□□ 0.6
NR1H2P55055 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.82■□□□□ 0.6
NR1H2P55055 AC020916.1-201ENST00000587762 1774 ntBASIC18.82■□□□□ 0.6
NR1H2P55055 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H2P55055 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H2P55055 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H2P55055 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H2P55055 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H2P55055 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.82■□□□□ 0.6
NR1H2P55055 LTB4R2-202ENST00000528054 3092 ntBASIC18.82■□□□□ 0.6
NR1H2P55055 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR1H2P55055 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
NR1H2P55055 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
NR1H2P55055 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.81■□□□□ 0.6
NR1H2P55055 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NR1H2P55055 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NR1H2P55055 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.81■□□□□ 0.6
NR1H2P55055 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NR1H2P55055 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NR1H2P55055 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.81■□□□□ 0.6
NR1H2P55055 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NR1H2P55055 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NR1H2P55055 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.81■□□□□ 0.6
NR1H2P55055 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.81■□□□□ 0.6
NR1H2P55055 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.81■□□□□ 0.6
NR1H2P55055 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NR1H2P55055 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR1H2P55055 AC093484.2-201ENST00000580996 2166 ntBASIC18.81■□□□□ 0.6
NR1H2P55055 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR1H2P55055 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NR1H2P55055 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR1H2P55055 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NR1H2P55055 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NR1H2P55055 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
NR1H2P55055 AC006015.1-201ENST00000429970 570 ntBASIC18.8■□□□□ 0.6
NR1H2P55055 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.8■□□□□ 0.6
NR1H2P55055 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.8■□□□□ 0.6
NR1H2P55055 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.8■□□□□ 0.6
NR1H2P55055 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.8■□□□□ 0.6
NR1H2P55055 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR1H2P55055 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR1H2P55055 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR1H2P55055 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
NR1H2P55055 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR1H2P55055 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR1H2P55055 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms