Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CLCN4P51793 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCN4P51793 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.05■□□□□ 0.96
CLCN4P51793 AC007375.3-201ENST00000600936 2314 ntBASIC21.05■□□□□ 0.96
CLCN4P51793 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCN4P51793 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CLCN4P51793 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.05■□□□□ 0.96
CLCN4P51793 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
CLCN4P51793 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.05■□□□□ 0.96
CLCN4P51793 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.05■□□□□ 0.96
CLCN4P51793 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.05■□□□□ 0.96
CLCN4P51793 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.05■□□□□ 0.96
CLCN4P51793 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.05■□□□□ 0.96
CLCN4P51793 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCN4P51793 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN4P51793 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCN4P51793 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN4P51793 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN4P51793 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN4P51793 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN4P51793 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN4P51793 AC005521.1-201ENST00000393351 872 ntBASIC21.04■□□□□ 0.96
CLCN4P51793 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.04■□□□□ 0.96
CLCN4P51793 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.04■□□□□ 0.96
CLCN4P51793 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCN4P51793 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.04■□□□□ 0.96
CLCN4P51793 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN4P51793 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN4P51793 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN4P51793 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN4P51793 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN4P51793 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CLCN4P51793 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN4P51793 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
CLCN4P51793 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN4P51793 KRT16P1-201ENST00000399124 1418 ntBASIC21.04■□□□□ 0.96
CLCN4P51793 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN4P51793 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.03■□□□□ 0.96
CLCN4P51793 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN4P51793 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.03■□□□□ 0.96
CLCN4P51793 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN4P51793 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN4P51793 LINC01568-207ENST00000641790 1380 ntBASIC21.03■□□□□ 0.96
CLCN4P51793 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN4P51793 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN4P51793 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN4P51793 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.03■□□□□ 0.96
CLCN4P51793 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN4P51793 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.03■□□□□ 0.96
CLCN4P51793 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN4P51793 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.03■□□□□ 0.96
CLCN4P51793 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.03■□□□□ 0.96
CLCN4P51793 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.03■□□□□ 0.96
CLCN4P51793 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN4P51793 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN4P51793 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN4P51793 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.03■□□□□ 0.96
CLCN4P51793 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN4P51793 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.03■□□□□ 0.96
CLCN4P51793 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CLCN4P51793 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.03■□□□□ 0.96
CLCN4P51793 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CLCN4P51793 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN4P51793 CYP2D8P-201ENST00000433633 1490 ntBASIC21.02■□□□□ 0.96
CLCN4P51793 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN4P51793 AL390955.1-201ENST00000428694 934 ntBASIC21.02■□□□□ 0.96
CLCN4P51793 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.02■□□□□ 0.96
CLCN4P51793 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN4P51793 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.02■□□□□ 0.96
CLCN4P51793 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CLCN4P51793 FITM1-202ENST00000559294 800 ntBASIC21.02■□□□□ 0.96
CLCN4P51793 AL049597.2-201ENST00000565575 961 ntBASIC21.02■□□□□ 0.96
CLCN4P51793 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN4P51793 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.02■□□□□ 0.95
CLCN4P51793 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.01■□□□□ 0.95
CLCN4P51793 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN4P51793 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN4P51793 AL121603.2-201ENST00000557373 2117 ntBASIC21.01■□□□□ 0.95
CLCN4P51793 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN4P51793 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.01■□□□□ 0.95
CLCN4P51793 AC113347.1-201ENST00000413321 391 ntBASIC21.01■□□□□ 0.95
CLCN4P51793 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.01■□□□□ 0.95
CLCN4P51793 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.01■□□□□ 0.95
CLCN4P51793 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.01■□□□□ 0.95
CLCN4P51793 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.01■□□□□ 0.95
CLCN4P51793 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.01■□□□□ 0.95
CLCN4P51793 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.01■□□□□ 0.95
CLCN4P51793 NAPSB-206ENST00000562112 1266 ntBASIC21.01■□□□□ 0.95
CLCN4P51793 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.01■□□□□ 0.95
CLCN4P51793 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.01■□□□□ 0.95
CLCN4P51793 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.01■□□□□ 0.95
CLCN4P51793 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CLCN4P51793 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN4P51793 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CLCN4P51793 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN4P51793 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLCN4P51793 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLCN4P51793 H19-201ENST00000411754 1788 ntTSL 5 BASIC21■□□□□ 0.95
CLCN4P51793 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN4P51793 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
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