Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 OR10C1-204ENST00000622521 1039 ntBASIC18.85■□□□□ 0.61
CLK3P49761 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK3P49761 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK3P49761 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.85■□□□□ 0.61
CLK3P49761 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.85■□□□□ 0.61
CLK3P49761 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK3P49761 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLK3P49761 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK3P49761 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK3P49761 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.85■□□□□ 0.61
CLK3P49761 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CLK3P49761 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLK3P49761 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK3P49761 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK3P49761 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CLK3P49761 AC125437.2-201ENST00000625180 2167 ntBASIC18.85■□□□□ 0.61
CLK3P49761 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK3P49761 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK3P49761 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK3P49761 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.84■□□□□ 0.61
CLK3P49761 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.84■□□□□ 0.61
CLK3P49761 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK3P49761 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLK3P49761 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK3P49761 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLK3P49761 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.84■□□□□ 0.61
CLK3P49761 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK3P49761 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK3P49761 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLK3P49761 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLK3P49761 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.84■□□□□ 0.61
CLK3P49761 CYP2T1P-201ENST00000432607 1285 ntBASIC18.84■□□□□ 0.61
CLK3P49761 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLK3P49761 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.84■□□□□ 0.61
CLK3P49761 AC006970.2-201ENST00000450065 779 ntBASIC18.84■□□□□ 0.61
CLK3P49761 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.84■□□□□ 0.61
CLK3P49761 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLK3P49761 RARRES2P4-201ENST00000514074 484 ntBASIC18.84■□□□□ 0.61
CLK3P49761 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
CLK3P49761 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK3P49761 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.84■□□□□ 0.61
CLK3P49761 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK3P49761 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK3P49761 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLK3P49761 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLK3P49761 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLK3P49761 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLK3P49761 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLK3P49761 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLK3P49761 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLK3P49761 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLK3P49761 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.83■□□□□ 0.61
CLK3P49761 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.83■□□□□ 0.61
CLK3P49761 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.83■□□□□ 0.61
CLK3P49761 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.83■□□□□ 0.61
CLK3P49761 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.83■□□□□ 0.6
CLK3P49761 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLK3P49761 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.83■□□□□ 0.6
CLK3P49761 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CLK3P49761 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK3P49761 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CLK3P49761 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.83■□□□□ 0.6
CLK3P49761 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.83■□□□□ 0.6
CLK3P49761 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.83■□□□□ 0.6
CLK3P49761 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK3P49761 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLK3P49761 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK3P49761 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.82■□□□□ 0.6
CLK3P49761 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLK3P49761 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.82■□□□□ 0.6
CLK3P49761 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK3P49761 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK3P49761 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.82■□□□□ 0.6
CLK3P49761 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK3P49761 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.82■□□□□ 0.6
CLK3P49761 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLK3P49761 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK3P49761 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK3P49761 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK3P49761 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK3P49761 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CLK3P49761 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.82■□□□□ 0.6
CLK3P49761 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.82■□□□□ 0.6
CLK3P49761 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLK3P49761 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.82■□□□□ 0.6
CLK3P49761 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.82■□□□□ 0.6
CLK3P49761 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK3P49761 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK3P49761 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK3P49761 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLK3P49761 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.81■□□□□ 0.6
CLK3P49761 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.81■□□□□ 0.6
CLK3P49761 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLK3P49761 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLK3P49761 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLK3P49761 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.81■□□□□ 0.6
CLK3P49761 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLK3P49761 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLK3P49761 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLK3P49761 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms