Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC12.63□□□□□ -0.39
UBE2AP49459 AC137761.2-201ENST00000561729 223 ntBASIC12.63□□□□□ -0.39
UBE2AP49459 AC145350.3-201ENST00000569033 163 ntBASIC12.63□□□□□ -0.39
UBE2AP49459 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
UBE2AP49459 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 MYCNOS-205ENST00000641950 531 ntBASIC12.63□□□□□ -0.39
UBE2AP49459 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.63□□□□□ -0.39
UBE2AP49459 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
UBE2AP49459 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
UBE2AP49459 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
UBE2AP49459 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
UBE2AP49459 AC019069.1-201ENST00000610008 1333 ntBASIC12.62□□□□□ -0.39
UBE2AP49459 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
UBE2AP49459 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
UBE2AP49459 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
UBE2AP49459 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
UBE2AP49459 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
UBE2AP49459 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
UBE2AP49459 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC12.62□□□□□ -0.39
UBE2AP49459 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
UBE2AP49459 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC12.62□□□□□ -0.39
UBE2AP49459 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
UBE2AP49459 PGM5P4-201ENST00000421970 445 ntBASIC12.62□□□□□ -0.39
UBE2AP49459 AC097381.1-201ENST00000429019 1296 ntBASIC12.62□□□□□ -0.39
UBE2AP49459 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC12.62□□□□□ -0.39
UBE2AP49459 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC12.62□□□□□ -0.39
UBE2AP49459 PLD4-205ENST00000553861 667 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2AP49459 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC12.62□□□□□ -0.39
UBE2AP49459 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
UBE2AP49459 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
UBE2AP49459 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2AP49459 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
UBE2AP49459 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2AP49459 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
UBE2AP49459 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
UBE2AP49459 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2AP49459 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
UBE2AP49459 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2AP49459 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
UBE2AP49459 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2AP49459 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2AP49459 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2AP49459 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2AP49459 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2AP49459 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2AP49459 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
UBE2AP49459 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC12.61□□□□□ -0.39
UBE2AP49459 DBI-210ENST00000542275 757 ntTSL 5 BASIC12.61□□□□□ -0.39
UBE2AP49459 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2AP49459 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC12.61□□□□□ -0.39
UBE2AP49459 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC12.61□□□□□ -0.39
UBE2AP49459 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC12.61□□□□□ -0.39
UBE2AP49459 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
UBE2AP49459 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2AP49459 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
UBE2AP49459 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
UBE2AP49459 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC12.61□□□□□ -0.39
UBE2AP49459 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2AP49459 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2AP49459 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2AP49459 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2AP49459 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
UBE2AP49459 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2AP49459 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
UBE2AP49459 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2AP49459 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2AP49459 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC12.61□□□□□ -0.39
UBE2AP49459 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
UBE2AP49459 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
UBE2AP49459 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2AP49459 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2AP49459 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
UBE2AP49459 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms