Protein–RNA interactions for Protein: P46992

YJL171C, Cell wall protein YJL171C, yeastyeast

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJL171CP46992 MYO1YHR023W 5787 nt2.09□□□□□ -2.07
YJL171CP46992 tC(GCA)QtC(GCA)Q 76 nt2.09□□□□□ -2.07
YJL171CP46992 YLL006W-AYLL006W-A 177 nt2.09□□□□□ -2.07
YJL171CP46992 YOR316C-AYOR316C-A 210 nt2.08□□□□□ -2.08
YJL171CP46992 SMC4YLR086W 4257 nt2.08□□□□□ -2.08
YJL171CP46992 FKS1YLR342W 5631 nt2.07□□□□□ -2.08
YJL171CP46992 CFT1YDR301W 4074 nt2.07□□□□□ -2.08
YJL171CP46992 BNI1YNL271C 5862 nt2.05□□□□□ -2.08
YJL171CP46992 TRA1YHR099W 11235 nt2.05□□□□□ -2.08
YJL171CP46992 YNL284C-BYNL284C-B 5268 nt2.04□□□□□ -2.08
YJL171CP46992 VAM6YDL077C 3150 nt2.04□□□□□ -2.08
YJL171CP46992 YPR117WYPR117W 7470 nt2□□□□□ -2.09
YJL171CP46992 IRA2YOL081W 9240 nt2□□□□□ -2.09
YJL171CP46992 BPH1YCR032W 6504 nt2□□□□□ -2.09
YJL171CP46992 CSF1YLR087C 8877 nt2□□□□□ -2.09
YJL171CP46992 LAA1YJL207C 6045 nt1.99□□□□□ -2.09
YJL171CP46992 SPT7YBR081C 3999 nt1.99□□□□□ -2.09
YJL171CP46992 SBH2YER019C-A 267 nt1.96□□□□□ -2.1
YJL171CP46992 SKI3YPR189W 4299 nt1.96□□□□□ -2.1
YJL171CP46992 SWI4YER111C 3282 nt1.95□□□□□ -2.1
YJL171CP46992 YOL014WYOL014W 375 nt1.89□□□□□ -2.11
YJL171CP46992 SSK2YNR031C 4740 nt1.87□□□□□ -2.11
YJL171CP46992 TOR2YKL203C 7425 nt1.87□□□□□ -2.11
YJL171CP46992 CDC39YCR093W 6327 nt1.86□□□□□ -2.11
YJL171CP46992 NUP145YGL092W 3954 nt1.85□□□□□ -2.11
YJL171CP46992 RPL41BYDL133C-A 78 nt1.85□□□□□ -2.11
YJL171CP46992 MEC1YBR136W 7107 nt1.84□□□□□ -2.12
YJL171CP46992 TMA7YLR262C-A 195 nt1.82□□□□□ -2.12
YJL171CP46992 FIG2YCR089W 4830 nt1.81□□□□□ -2.12
YJL171CP46992 MON2YNL297C 4911 nt1.79□□□□□ -2.12
YJL171CP46992 PMD1YER132C 5262 nt1.79□□□□□ -2.12
YJL171CP46992 NUP188YML103C 4968 nt1.78□□□□□ -2.12
YJL171CP46992 DNF3YMR162C 4971 nt1.78□□□□□ -2.12
YJL171CP46992 YHR214C-BYHR214C-B 5382 nt1.77□□□□□ -2.13
YJL171CP46992 USO1YDL058W 5373 nt1.71□□□□□ -2.14
YJL171CP46992 YOR093CYOR093C 4947 nt1.71□□□□□ -2.14
YJL171CP46992 IML1YJR138W 4755 nt1.68□□□□□ -2.14
YJL171CP46992 YMR247W-AYMR247W-A 144 nt1.68□□□□□ -2.14
YJL171CP46992 YMR045CYMR045C 5268 nt1.66□□□□□ -2.14
YJL171CP46992 YJL113WYJL113W 4647 nt1.65□□□□□ -2.14
YJL171CP46992 tT(UGU)HtT(UGU)H 72 nt1.64□□□□□ -2.15
YJL171CP46992 YKL145W-AYKL145W-A 93 nt1.64□□□□□ -2.15
YJL171CP46992 LTE1YAL024C 4308 nt1.64□□□□□ -2.15
YJL171CP46992 YOR335W-AYOR335W-A 81 nt1.62□□□□□ -2.15
YJL171CP46992 YOR192C-BYOR192C-B 5313 nt1.62□□□□□ -2.15
YJL171CP46992 IRA1YBR140C 9279 nt1.61□□□□□ -2.15
YJL171CP46992 snR58snR58 96 nt1.59□□□□□ -2.15
YJL171CP46992 snR6snR6 112 nt1.55□□□□□ -2.16
YJL171CP46992 YML100W-AYML100W-A 174 nt1.55□□□□□ -2.16
YJL171CP46992 tH(GUG)E1tH(GUG)E1 72 nt1.54□□□□□ -2.16
YJL171CP46992 tH(GUG)E2tH(GUG)E2 72 nt1.54□□□□□ -2.16
YJL171CP46992 tH(GUG)G1tH(GUG)G1 72 nt1.54□□□□□ -2.16
YJL171CP46992 tH(GUG)G2tH(GUG)G2 72 nt1.54□□□□□ -2.16
YJL171CP46992 tH(GUG)HtH(GUG)H 72 nt1.54□□□□□ -2.16
YJL171CP46992 tH(GUG)KtH(GUG)K 72 nt1.54□□□□□ -2.16
YJL171CP46992 tH(GUG)MtH(GUG)M 72 nt1.54□□□□□ -2.16
YJL171CP46992 BUD3YCL014W 4911 nt1.52□□□□□ -2.17
YJL171CP46992 YBL100W-BYBL100W-B 5313 nt1.52□□□□□ -2.17
YJL171CP46992 ESP1YGR098C 4893 nt1.46□□□□□ -2.18
YJL171CP46992 PAU24YBR301W 363 nt1.45□□□□□ -2.18
YJL171CP46992 VPS15YBR097W 4365 nt1.43□□□□□ -2.18
YJL171CP46992 RKR1YMR247C 4689 nt1.43□□□□□ -2.18
YJL171CP46992 tQ(UUG)E2tQ(UUG)E2 72 nt1.42□□□□□ -2.18
YJL171CP46992 tV(UAC)BtV(UAC)B 74 nt1.41□□□□□ -2.18
YJL171CP46992 tV(UAC)DtV(UAC)D 74 nt1.41□□□□□ -2.18
YJL171CP46992 SCC2YDR180W 4482 nt1.39□□□□□ -2.19
YJL171CP46992 YJR029WYJR029W 5268 nt1.37□□□□□ -2.19
YJL171CP46992 FMP27YLR454W 7887 nt1.36□□□□□ -2.19
YJL171CP46992 snR73snR73 106 nt1.36□□□□□ -2.19
YJL171CP46992 THO2YNL139C 4794 nt1.34□□□□□ -2.2
YJL171CP46992 IQG1YPL242C 4488 nt1.33□□□□□ -2.2
YJL171CP46992 YPR137C-BYPR137C-B 5268 nt1.3□□□□□ -2.2
YJL171CP46992 HKR1YDR420W 5409 nt1.26□□□□□ -2.21
YJL171CP46992 UTP20YBL004W 7482 nt1.24□□□□□ -2.21
YJL171CP46992 PAU9YBL108C-A 129 nt1.2□□□□□ -2.22
YJL171CP46992 tF(GAA)BtF(GAA)B 73 nt1.18□□□□□ -2.22
YJL171CP46992 tF(GAA)FtF(GAA)F 73 nt1.18□□□□□ -2.22
YJL171CP46992 tF(GAA)GtF(GAA)G 73 nt1.18□□□□□ -2.22
YJL171CP46992 tF(GAA)H1tF(GAA)H1 73 nt1.18□□□□□ -2.22
YJL171CP46992 tF(GAA)H2tF(GAA)H2 73 nt1.18□□□□□ -2.22
YJL171CP46992 tF(GAA)MtF(GAA)M 73 nt1.18□□□□□ -2.22
YJL171CP46992 tF(GAA)P1tF(GAA)P1 73 nt1.18□□□□□ -2.22
YJL171CP46992 tF(GAA)P2tF(GAA)P2 73 nt1.18□□□□□ -2.22
YJL171CP46992 BEM2YER155C 6504 nt1.17□□□□□ -2.22
YJL171CP46992 DOP1YDR141C 5097 nt1.12□□□□□ -2.23
YJL171CP46992 YMR272W-AYMR272W-A 114 nt1.04□□□□□ -2.24
YJL171CP46992 YOR186C-AYOR186C-A 210 nt1□□□□□ -2.25
YJL171CP46992 MLP1YKR095W 5628 nt0.98□□□□□ -2.25
YJL171CP46992 URB1YKL014C 5295 nt0.97□□□□□ -2.25
YJL171CP46992 snR161snR161 161 nt0.94□□□□□ -2.26
YJL171CP46992 snR87snR87 109 nt0.93□□□□□ -2.26
YJL171CP46992 tT(AGU)BtT(AGU)B 73 nt0.92□□□□□ -2.26
YJL171CP46992 tT(AGU)CtT(AGU)C 73 nt0.92□□□□□ -2.26
YJL171CP46992 tT(AGU)DtT(AGU)D 73 nt0.92□□□□□ -2.26
YJL171CP46992 tT(AGU)HtT(AGU)H 73 nt0.92□□□□□ -2.26
YJL171CP46992 tT(AGU)I1tT(AGU)I1 73 nt0.92□□□□□ -2.26
YJL171CP46992 tT(AGU)I2tT(AGU)I2 73 nt0.92□□□□□ -2.26
YJL171CP46992 tT(AGU)JtT(AGU)J 73 nt0.92□□□□□ -2.26
YJL171CP46992 tT(AGU)N1tT(AGU)N1 73 nt0.92□□□□□ -2.26
YJL171CP46992 tT(AGU)N2tT(AGU)N2 73 nt0.92□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms