Protein–RNA interactions for Protein: P46990

RPL17B, 60S ribosomal protein L17-B, yeastyeast

Known RBP Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL17BP46990 YGR130CYGR130C 2451 nt2.35□□□□□ -2.03
RPL17BP46990 USO1YDL058W 5373 nt2.34□□□□□ -2.04
RPL17BP46990 TMA7YLR262C-A 195 nt2.33□□□□□ -2.04
RPL17BP46990 PMD1YER132C 5262 nt2.32□□□□□ -2.04
RPL17BP46990 CFT1YDR301W 4074 nt2.32□□□□□ -2.04
RPL17BP46990 SEC16YPL085W 6588 nt2.31□□□□□ -2.04
RPL17BP46990 TOR2YKL203C 7425 nt2.29□□□□□ -2.04
RPL17BP46990 BNI1YNL271C 5862 nt2.29□□□□□ -2.04
RPL17BP46990 TOR1YJR066W 7413 nt2.28□□□□□ -2.04
RPL17BP46990 VAM6YDL077C 3150 nt2.24□□□□□ -2.05
RPL17BP46990 TRA1YHR099W 11235 nt2.22□□□□□ -2.05
RPL17BP46990 CSF1YLR087C 8877 nt2.22□□□□□ -2.05
RPL17BP46990 YPR117WYPR117W 7470 nt2.2□□□□□ -2.06
RPL17BP46990 SPP41YDR464W 4308 nt2.2□□□□□ -2.06
RPL17BP46990 SSK2YNR031C 4740 nt2.2□□□□□ -2.06
RPL17BP46990 PEP1YBL017C 4740 nt2.19□□□□□ -2.06
RPL17BP46990 VPS13YLL040C 9435 nt2.17□□□□□ -2.06
RPL17BP46990 YOR093CYOR093C 4947 nt2.13□□□□□ -2.07
RPL17BP46990 DNF1YER166W 4716 nt2.12□□□□□ -2.07
RPL17BP46990 YMR045CYMR045C 5268 nt2.08□□□□□ -2.08
RPL17BP46990 YMR247W-AYMR247W-A 144 nt2.06□□□□□ -2.08
RPL17BP46990 snR77snR77 88 nt2.05□□□□□ -2.08
RPL17BP46990 FAB1YFR019W 6837 nt2.05□□□□□ -2.08
RPL17BP46990 YOR316C-AYOR316C-A 210 nt2.02□□□□□ -2.09
RPL17BP46990 YHR214C-BYHR214C-B 5382 nt1.99□□□□□ -2.09
RPL17BP46990 tT(UGU)HtT(UGU)H 72 nt1.96□□□□□ -2.1
RPL17BP46990 YOR192C-BYOR192C-B 5313 nt1.95□□□□□ -2.1
RPL17BP46990 LTE1YAL024C 4308 nt1.94□□□□□ -2.1
RPL17BP46990 FKS1YLR342W 5631 nt1.93□□□□□ -2.1
RPL17BP46990 BRR2YER172C 6492 nt1.92□□□□□ -2.1
RPL17BP46990 BUD3YCL014W 4911 nt1.9□□□□□ -2.11
RPL17BP46990 SBH2YER019C-A 267 nt1.88□□□□□ -2.11
RPL17BP46990 YPR137C-BYPR137C-B 5268 nt1.87□□□□□ -2.11
RPL17BP46990 FIG2YCR089W 4830 nt1.84□□□□□ -2.11
RPL17BP46990 YJR029WYJR029W 5268 nt1.84□□□□□ -2.11
RPL17BP46990 YBL100W-BYBL100W-B 5313 nt1.81□□□□□ -2.12
RPL17BP46990 SOV1YMR066W 2697 nt1.79□□□□□ -2.12
RPL17BP46990 MEC1YBR136W 7107 nt1.75□□□□□ -2.13
RPL17BP46990 HKR1YDR420W 5409 nt1.75□□□□□ -2.13
RPL17BP46990 RKR1YMR247C 4689 nt1.75□□□□□ -2.13
RPL17BP46990 DNF3YMR162C 4971 nt1.75□□□□□ -2.13
RPL17BP46990 SCC2YDR180W 4482 nt1.73□□□□□ -2.13
RPL17BP46990 VPS15YBR097W 4365 nt1.72□□□□□ -2.13
RPL17BP46990 YMR272W-BYMR272W-B 108 nt1.71□□□□□ -2.14
RPL17BP46990 tQ(UUG)E2tQ(UUG)E2 72 nt1.69□□□□□ -2.14
RPL17BP46990 YML100W-AYML100W-A 174 nt1.68□□□□□ -2.14
RPL17BP46990 PAU24YBR301W 363 nt1.67□□□□□ -2.14
RPL17BP46990 MLP1YKR095W 5628 nt1.63□□□□□ -2.15
RPL17BP46990 YJL113WYJL113W 4647 nt1.62□□□□□ -2.15
RPL17BP46990 IQG1YPL242C 4488 nt1.62□□□□□ -2.15
RPL17BP46990 BEM2YER155C 6504 nt1.61□□□□□ -2.15
RPL17BP46990 IRA1YBR140C 9279 nt1.59□□□□□ -2.15
RPL17BP46990 DOP1YDR141C 5097 nt1.55□□□□□ -2.16
RPL17BP46990 MYO1YHR023W 5787 nt1.53□□□□□ -2.17
RPL17BP46990 CCH1YGR217W 6120 nt1.49□□□□□ -2.17
RPL17BP46990 YOR186C-AYOR186C-A 210 nt1.46□□□□□ -2.18
RPL17BP46990 ESP1YGR098C 4893 nt1.41□□□□□ -2.18
RPL17BP46990 tC(GCA)QtC(GCA)Q 76 nt1.33□□□□□ -2.2
RPL17BP46990 FMP27YLR454W 7887 nt1.32□□□□□ -2.2
RPL17BP46990 THO2YNL139C 4794 nt1.32□□□□□ -2.2
RPL17BP46990 tH(GUG)E1tH(GUG)E1 72 nt1.27□□□□□ -2.21
RPL17BP46990 tH(GUG)E2tH(GUG)E2 72 nt1.27□□□□□ -2.21
RPL17BP46990 tH(GUG)G1tH(GUG)G1 72 nt1.27□□□□□ -2.21
RPL17BP46990 tH(GUG)G2tH(GUG)G2 72 nt1.27□□□□□ -2.21
RPL17BP46990 tH(GUG)HtH(GUG)H 72 nt1.27□□□□□ -2.21
RPL17BP46990 tH(GUG)KtH(GUG)K 72 nt1.27□□□□□ -2.21
RPL17BP46990 tH(GUG)MtH(GUG)M 72 nt1.27□□□□□ -2.21
RPL17BP46990 IML1YJR138W 4755 nt1.26□□□□□ -2.21
RPL17BP46990 UTP20YBL004W 7482 nt1.22□□□□□ -2.21
RPL17BP46990 tV(UAC)BtV(UAC)B 74 nt1.17□□□□□ -2.22
RPL17BP46990 tV(UAC)DtV(UAC)D 74 nt1.17□□□□□ -2.22
RPL17BP46990 PAU9YBL108C-A 129 nt1.13□□□□□ -2.23
RPL17BP46990 RPL41BYDL133C-A 78 nt1.08□□□□□ -2.24
RPL17BP46990 EMT1tM(CAU)D 73 nt1.07□□□□□ -2.24
RPL17BP46990 EMT5tM(CAU)J1 73 nt1.07□□□□□ -2.24
RPL17BP46990 EMT3tM(CAU)J2 73 nt1.07□□□□□ -2.24
RPL17BP46990 EMT4tM(CAU)M 73 nt1.07□□□□□ -2.24
RPL17BP46990 EMT2tM(CAU)O2 73 nt1.07□□□□□ -2.24
RPL17BP46990 YMR272W-AYMR272W-A 114 nt1.07□□□□□ -2.24
RPL17BP46990 YKL145W-AYKL145W-A 93 nt1.06□□□□□ -2.24
RPL17BP46990 YOL014WYOL014W 375 nt1.02□□□□□ -2.25
RPL17BP46990 YOR335W-AYOR335W-A 81 nt0.99□□□□□ -2.25
RPL17BP46990 YPR159C-AYPR159C-A 102 nt0.95□□□□□ -2.26
RPL17BP46990 snR58snR58 96 nt0.94□□□□□ -2.26
RPL17BP46990 snR6snR6 112 nt0.94□□□□□ -2.26
RPL17BP46990 snR128snR128 126 nt0.92□□□□□ -2.26
RPL17BP46990 tF(GAA)BtF(GAA)B 73 nt0.91□□□□□ -2.26
RPL17BP46990 tF(GAA)FtF(GAA)F 73 nt0.91□□□□□ -2.26
RPL17BP46990 tF(GAA)GtF(GAA)G 73 nt0.91□□□□□ -2.26
RPL17BP46990 tF(GAA)H1tF(GAA)H1 73 nt0.91□□□□□ -2.26
RPL17BP46990 tF(GAA)H2tF(GAA)H2 73 nt0.91□□□□□ -2.26
RPL17BP46990 tF(GAA)MtF(GAA)M 73 nt0.91□□□□□ -2.26
RPL17BP46990 tF(GAA)P1tF(GAA)P1 73 nt0.91□□□□□ -2.26
RPL17BP46990 tF(GAA)P2tF(GAA)P2 73 nt0.91□□□□□ -2.26
RPL17BP46990 UTP10YJL109C 5310 nt0.89□□□□□ -2.27
RPL17BP46990 snR161snR161 161 nt0.82□□□□□ -2.28
RPL17BP46990 tA(UGC)QtA(UGC)Q 76 nt0.8□□□□□ -2.28
RPL17BP46990 tT(AGU)BtT(AGU)B 73 nt0.66□□□□□ -2.3
RPL17BP46990 tT(AGU)CtT(AGU)C 73 nt0.66□□□□□ -2.3
RPL17BP46990 tT(AGU)DtT(AGU)D 73 nt0.66□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 39.2 ms