Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBX5P45973 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX5P45973 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.1■□□□□ 0.33
CBX5P45973 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX5P45973 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX5P45973 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBX5P45973 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX5P45973 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX5P45973 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBX5P45973 MIR572-201ENST00000384983 95 ntBASIC17.1■□□□□ 0.33
CBX5P45973 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CBX5P45973 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.1■□□□□ 0.33
CBX5P45973 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.1■□□□□ 0.33
CBX5P45973 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CBX5P45973 AC125437.2-201ENST00000625180 2167 ntBASIC17.1■□□□□ 0.33
CBX5P45973 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.1■□□□□ 0.33
CBX5P45973 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX5P45973 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.1■□□□□ 0.33
CBX5P45973 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX5P45973 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX5P45973 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX5P45973 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CBX5P45973 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.1■□□□□ 0.33
CBX5P45973 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.1■□□□□ 0.33
CBX5P45973 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.1■□□□□ 0.33
CBX5P45973 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.1■□□□□ 0.33
CBX5P45973 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.1■□□□□ 0.33
CBX5P45973 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX5P45973 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX5P45973 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
CBX5P45973 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBX5P45973 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBX5P45973 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX5P45973 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX5P45973 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX5P45973 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX5P45973 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX5P45973 AL136116.3-201ENST00000402907 1138 ntBASIC17.09■□□□□ 0.33
CBX5P45973 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.09■□□□□ 0.33
CBX5P45973 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.09■□□□□ 0.33
CBX5P45973 AC024257.2-201ENST00000549699 147 ntBASIC17.09■□□□□ 0.33
CBX5P45973 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.09■□□□□ 0.33
CBX5P45973 AC027682.1-201ENST00000562846 899 ntBASIC17.09■□□□□ 0.33
CBX5P45973 AC008764.7-201ENST00000593779 1081 ntBASIC17.09■□□□□ 0.33
CBX5P45973 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX5P45973 AL136162.1-201ENST00000607711 1078 ntBASIC17.09■□□□□ 0.33
CBX5P45973 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.09■□□□□ 0.33
CBX5P45973 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX5P45973 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CBX5P45973 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBX5P45973 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX5P45973 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.09■□□□□ 0.33
CBX5P45973 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.09■□□□□ 0.33
CBX5P45973 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX5P45973 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CBX5P45973 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CBX5P45973 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX5P45973 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CBX5P45973 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CBX5P45973 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CBX5P45973 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CBX5P45973 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CBX5P45973 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CBX5P45973 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CBX5P45973 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.08■□□□□ 0.33
CBX5P45973 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CBX5P45973 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CBX5P45973 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CBX5P45973 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CBX5P45973 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.08■□□□□ 0.32
CBX5P45973 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.08■□□□□ 0.32
CBX5P45973 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.08■□□□□ 0.32
CBX5P45973 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
CBX5P45973 AC135279.3-201ENST00000610945 1311 ntBASIC17.08■□□□□ 0.32
CBX5P45973 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX5P45973 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX5P45973 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX5P45973 AC099791.1-201ENST00000416440 715 ntBASIC17.08■□□□□ 0.32
CBX5P45973 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CBX5P45973 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CBX5P45973 HTR7P1-202ENST00000624664 4411 ntBASIC17.08■□□□□ 0.32
CBX5P45973 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX5P45973 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX5P45973 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CBX5P45973 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX5P45973 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX5P45973 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX5P45973 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CBX5P45973 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX5P45973 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CBX5P45973 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CBX5P45973 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CBX5P45973 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX5P45973 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX5P45973 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX5P45973 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CBX5P45973 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX5P45973 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.07■□□□□ 0.32
CBX5P45973 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX5P45973 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms