Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A3P43003 MKRN4P-201ENST00000444706 1521 ntBASIC18.32■□□□□ 0.52
SLC1A3P43003 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A3P43003 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC1A3P43003 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A3P43003 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SLC1A3P43003 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC1A3P43003 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC1A3P43003 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A3P43003 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A3P43003 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC1A3P43003 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A3P43003 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SLC1A3P43003 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A3P43003 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC1A3P43003 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A3P43003 AC006970.2-201ENST00000450065 779 ntBASIC18.31■□□□□ 0.52
SLC1A3P43003 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC1A3P43003 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.31■□□□□ 0.52
SLC1A3P43003 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC1A3P43003 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC1A3P43003 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC1A3P43003 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SLC1A3P43003 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SLC1A3P43003 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC1A3P43003 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
SLC1A3P43003 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
SLC1A3P43003 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A3P43003 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A3P43003 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A3P43003 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
SLC1A3P43003 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
SLC1A3P43003 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A3P43003 KRT17P1-201ENST00000399211 1546 ntBASIC18.3■□□□□ 0.52
SLC1A3P43003 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SLC1A3P43003 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC1A3P43003 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A3P43003 LSM12P1-201ENST00000411836 588 ntBASIC18.3■□□□□ 0.52
SLC1A3P43003 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC1A3P43003 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.3■□□□□ 0.52
SLC1A3P43003 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC1A3P43003 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLC1A3P43003 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC1A3P43003 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.3■□□□□ 0.52
SLC1A3P43003 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC1A3P43003 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A3P43003 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A3P43003 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A3P43003 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC1A3P43003 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A3P43003 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A3P43003 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC1A3P43003 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A3P43003 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A3P43003 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC1A3P43003 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC1A3P43003 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A3P43003 AL121832.2-201ENST00000610979 668 ntBASIC18.29■□□□□ 0.52
SLC1A3P43003 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC1A3P43003 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC1A3P43003 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A3P43003 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A3P43003 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A3P43003 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC1A3P43003 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC1A3P43003 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A3P43003 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC1A3P43003 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SLC1A3P43003 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A3P43003 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A3P43003 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A3P43003 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC1A3P43003 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A3P43003 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC1A3P43003 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC1A3P43003 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A3P43003 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A3P43003 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A3P43003 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC1A3P43003 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC1A3P43003 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SLC1A3P43003 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC1A3P43003 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC1A3P43003 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC1A3P43003 AC083906.2-201ENST00000511578 360 ntBASIC18.28■□□□□ 0.52
SLC1A3P43003 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.28■□□□□ 0.52
SLC1A3P43003 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC1A3P43003 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC1A3P43003 C2orf69P4-201ENST00000565394 541 ntBASIC18.28■□□□□ 0.52
SLC1A3P43003 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A3P43003 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A3P43003 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SLC1A3P43003 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A3P43003 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SLC1A3P43003 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A3P43003 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC1A3P43003 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A3P43003 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC1A3P43003 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A3P43003 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms