Protein–RNA interactions for Protein: P32607

RTG1, Retrograde regulation protein 1, yeastyeast

Predictions only

Length 177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTG1P32607 snR77snR77 88 nt1.89□□□□□ -2.11
RTG1P32607 SEC31YDL195W 3822 nt1.88□□□□□ -2.11
RTG1P32607 YMR045CYMR045C 5268 nt1.88□□□□□ -2.11
RTG1P32607 CDC39YCR093W 6327 nt1.87□□□□□ -2.11
RTG1P32607 MON2YNL297C 4911 nt1.86□□□□□ -2.11
RTG1P32607 NUP188YML103C 4968 nt1.86□□□□□ -2.11
RTG1P32607 PMD1YER132C 5262 nt1.84□□□□□ -2.12
RTG1P32607 VAM6YDL077C 3150 nt1.8□□□□□ -2.12
RTG1P32607 SOV1YMR066W 2697 nt1.8□□□□□ -2.12
RTG1P32607 SPT7YBR081C 3999 nt1.8□□□□□ -2.12
RTG1P32607 TOR2YKL203C 7425 nt1.8□□□□□ -2.12
RTG1P32607 SEC16YPL085W 6588 nt1.78□□□□□ -2.12
RTG1P32607 YOR316C-AYOR316C-A 210 nt1.78□□□□□ -2.12
RTG1P32607 YGR130CYGR130C 2451 nt1.78□□□□□ -2.12
RTG1P32607 MYO1YHR023W 5787 nt1.75□□□□□ -2.13
RTG1P32607 YPR117WYPR117W 7470 nt1.74□□□□□ -2.13
RTG1P32607 BST1YFL025C 3090 nt1.74□□□□□ -2.13
RTG1P32607 SSK2YNR031C 4740 nt1.72□□□□□ -2.13
RTG1P32607 TMA7YLR262C-A 195 nt1.72□□□□□ -2.13
RTG1P32607 SBH2YER019C-A 267 nt1.69□□□□□ -2.14
RTG1P32607 PEP1YBL017C 4740 nt1.69□□□□□ -2.14
RTG1P32607 YHR214C-BYHR214C-B 5382 nt1.67□□□□□ -2.14
RTG1P32607 VPS13YLL040C 9435 nt1.67□□□□□ -2.14
RTG1P32607 CFT1YDR301W 4074 nt1.67□□□□□ -2.14
RTG1P32607 SPP41YDR464W 4308 nt1.64□□□□□ -2.15
RTG1P32607 YOR093CYOR093C 4947 nt1.63□□□□□ -2.15
RTG1P32607 VPS15YBR097W 4365 nt1.62□□□□□ -2.15
RTG1P32607 YOR192C-BYOR192C-B 5313 nt1.59□□□□□ -2.15
RTG1P32607 FKS1YLR342W 5631 nt1.57□□□□□ -2.16
RTG1P32607 tT(UGU)HtT(UGU)H 72 nt1.53□□□□□ -2.16
RTG1P32607 DNF3YMR162C 4971 nt1.52□□□□□ -2.17
RTG1P32607 tC(GCA)QtC(GCA)Q 76 nt1.5□□□□□ -2.17
RTG1P32607 FAB1YFR019W 6837 nt1.48□□□□□ -2.17
RTG1P32607 YMR247W-AYMR247W-A 144 nt1.42□□□□□ -2.18
RTG1P32607 YMR272W-BYMR272W-B 108 nt1.42□□□□□ -2.18
RTG1P32607 RKR1YMR247C 4689 nt1.42□□□□□ -2.18
RTG1P32607 FIG2YCR089W 4830 nt1.4□□□□□ -2.18
RTG1P32607 BUD3YCL014W 4911 nt1.39□□□□□ -2.19
RTG1P32607 YBL100W-BYBL100W-B 5313 nt1.39□□□□□ -2.19
RTG1P32607 LTE1YAL024C 4308 nt1.39□□□□□ -2.19
RTG1P32607 YML100W-AYML100W-A 174 nt1.38□□□□□ -2.19
RTG1P32607 BRR2YER172C 6492 nt1.38□□□□□ -2.19
RTG1P32607 tQ(UUG)E2tQ(UUG)E2 72 nt1.32□□□□□ -2.2
RTG1P32607 RPL41BYDL133C-A 78 nt1.3□□□□□ -2.2
RTG1P32607 YJR029WYJR029W 5268 nt1.3□□□□□ -2.2
RTG1P32607 PAU24YBR301W 363 nt1.29□□□□□ -2.2
RTG1P32607 HKR1YDR420W 5409 nt1.29□□□□□ -2.2
RTG1P32607 YOL014WYOL014W 375 nt1.28□□□□□ -2.2
RTG1P32607 IRA1YBR140C 9279 nt1.23□□□□□ -2.21
RTG1P32607 YJL113WYJL113W 4647 nt1.23□□□□□ -2.21
RTG1P32607 YKL145W-AYKL145W-A 93 nt1.2□□□□□ -2.22
RTG1P32607 SCC2YDR180W 4482 nt1.2□□□□□ -2.22
RTG1P32607 MEC1YBR136W 7107 nt1.2□□□□□ -2.22
RTG1P32607 ESP1YGR098C 4893 nt1.2□□□□□ -2.22
RTG1P32607 YPR137C-BYPR137C-B 5268 nt1.18□□□□□ -2.22
RTG1P32607 THO2YNL139C 4794 nt1.17□□□□□ -2.22
RTG1P32607 CCH1YGR217W 6120 nt1.15□□□□□ -2.22
RTG1P32607 YOR335W-AYOR335W-A 81 nt1.15□□□□□ -2.23
RTG1P32607 snR58snR58 96 nt1.12□□□□□ -2.23
RTG1P32607 FMP27YLR454W 7887 nt1.1□□□□□ -2.23
RTG1P32607 MLP1YKR095W 5628 nt1.08□□□□□ -2.24
RTG1P32607 DOP1YDR141C 5097 nt1.08□□□□□ -2.24
RTG1P32607 BEM2YER155C 6504 nt1.08□□□□□ -2.24
RTG1P32607 snR6snR6 112 nt1.07□□□□□ -2.24
RTG1P32607 tH(GUG)E1tH(GUG)E1 72 nt1.07□□□□□ -2.24
RTG1P32607 tH(GUG)E2tH(GUG)E2 72 nt1.07□□□□□ -2.24
RTG1P32607 tH(GUG)G1tH(GUG)G1 72 nt1.07□□□□□ -2.24
RTG1P32607 tH(GUG)G2tH(GUG)G2 72 nt1.07□□□□□ -2.24
RTG1P32607 tH(GUG)HtH(GUG)H 72 nt1.07□□□□□ -2.24
RTG1P32607 tH(GUG)KtH(GUG)K 72 nt1.07□□□□□ -2.24
RTG1P32607 tH(GUG)MtH(GUG)M 72 nt1.07□□□□□ -2.24
RTG1P32607 YOR186C-AYOR186C-A 210 nt1.06□□□□□ -2.24
RTG1P32607 PAU9YBL108C-A 129 nt1□□□□□ -2.25
RTG1P32607 tV(UAC)BtV(UAC)B 74 nt0.99□□□□□ -2.25
RTG1P32607 tV(UAC)DtV(UAC)D 74 nt0.99□□□□□ -2.25
RTG1P32607 IML1YJR138W 4755 nt0.96□□□□□ -2.26
RTG1P32607 EMT1tM(CAU)D 73 nt0.93□□□□□ -2.26
RTG1P32607 EMT5tM(CAU)J1 73 nt0.93□□□□□ -2.26
RTG1P32607 EMT3tM(CAU)J2 73 nt0.93□□□□□ -2.26
RTG1P32607 EMT4tM(CAU)M 73 nt0.93□□□□□ -2.26
RTG1P32607 EMT2tM(CAU)O2 73 nt0.93□□□□□ -2.26
RTG1P32607 IQG1YPL242C 4488 nt0.93□□□□□ -2.26
RTG1P32607 YMR272W-AYMR272W-A 114 nt0.9□□□□□ -2.27
RTG1P32607 snR73snR73 106 nt0.88□□□□□ -2.27
RTG1P32607 snR161snR161 161 nt0.79□□□□□ -2.28
RTG1P32607 snR128snR128 126 nt0.74□□□□□ -2.29
RTG1P32607 UTP20YBL004W 7482 nt0.73□□□□□ -2.29
RTG1P32607 tA(UGC)QtA(UGC)Q 76 nt0.71□□□□□ -2.3
RTG1P32607 UTP10YJL109C 5310 nt0.67□□□□□ -2.3
RTG1P32607 YPR159C-AYPR159C-A 102 nt0.65□□□□□ -2.31
RTG1P32607 tF(GAA)BtF(GAA)B 73 nt0.61□□□□□ -2.31
RTG1P32607 tF(GAA)FtF(GAA)F 73 nt0.61□□□□□ -2.31
RTG1P32607 tF(GAA)GtF(GAA)G 73 nt0.61□□□□□ -2.31
RTG1P32607 tF(GAA)H1tF(GAA)H1 73 nt0.61□□□□□ -2.31
RTG1P32607 tF(GAA)H2tF(GAA)H2 73 nt0.61□□□□□ -2.31
RTG1P32607 tF(GAA)MtF(GAA)M 73 nt0.61□□□□□ -2.31
RTG1P32607 tF(GAA)P1tF(GAA)P1 73 nt0.61□□□□□ -2.31
RTG1P32607 tF(GAA)P2tF(GAA)P2 73 nt0.61□□□□□ -2.31
RTG1P32607 tT(AGU)BtT(AGU)B 73 nt0.52□□□□□ -2.33
RTG1P32607 tT(AGU)CtT(AGU)C 73 nt0.52□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 27.3 ms