Protein–RNA interactions for Protein: P25555

GBP2, Single-strand telomeric DNA-binding protein GBP2, yeastyeast

Known RBP RIP-Chip data

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GBP2P25555 YKL106C-AYKL106C-A 120 nt1.8□□□□□ -2.12
GBP2P25555 SKI3YPR189W 4299 nt1.78□□□□□ -2.12
GBP2P25555 YMR272W-BYMR272W-B 108 nt1.78□□□□□ -2.12
GBP2P25555 MYO1YHR023W 5787 nt1.78□□□□□ -2.13
GBP2P25555 GEA2YEL022W 4380 nt1.77□□□□□ -2.13
GBP2P25555 DNF3YMR162C 4971 nt1.76□□□□□ -2.13
GBP2P25555 FAB1YFR019W 6837 nt1.75□□□□□ -2.13
GBP2P25555 YLL006W-AYLL006W-A 177 nt1.75□□□□□ -2.13
GBP2P25555 CDC39YCR093W 6327 nt1.74□□□□□ -2.13
GBP2P25555 SMC4YLR086W 4257 nt1.74□□□□□ -2.13
GBP2P25555 LAA1YJL207C 6045 nt1.74□□□□□ -2.13
GBP2P25555 SWI4YER111C 3282 nt1.72□□□□□ -2.13
GBP2P25555 snR67snR67 82 nt1.72□□□□□ -2.13
GBP2P25555 TMA7YLR262C-A 195 nt1.72□□□□□ -2.13
GBP2P25555 YMR247W-AYMR247W-A 144 nt1.72□□□□□ -2.13
GBP2P25555 CLU1YMR012W 3834 nt1.71□□□□□ -2.14
GBP2P25555 YNL284C-BYNL284C-B 5268 nt1.71□□□□□ -2.14
GBP2P25555 tT(UGU)HtT(UGU)H 72 nt1.69□□□□□ -2.14
GBP2P25555 BST1YFL025C 3090 nt1.69□□□□□ -2.14
GBP2P25555 YPR117WYPR117W 7470 nt1.66□□□□□ -2.14
GBP2P25555 VPS15YBR097W 4365 nt1.64□□□□□ -2.15
GBP2P25555 PEP1YBL017C 4740 nt1.63□□□□□ -2.15
GBP2P25555 MON2YNL297C 4911 nt1.63□□□□□ -2.15
GBP2P25555 CFT1YDR301W 4074 nt1.62□□□□□ -2.15
GBP2P25555 snR77snR77 88 nt1.62□□□□□ -2.15
GBP2P25555 BPH1YCR032W 6504 nt1.61□□□□□ -2.15
GBP2P25555 NUP145YGL092W 3954 nt1.6□□□□□ -2.15
GBP2P25555 VAM6YDL077C 3150 nt1.59□□□□□ -2.15
GBP2P25555 NUP188YML103C 4968 nt1.58□□□□□ -2.16
GBP2P25555 YGR130CYGR130C 2451 nt1.57□□□□□ -2.16
GBP2P25555 MLP2YIL149C 5040 nt1.57□□□□□ -2.16
GBP2P25555 BRR2YER172C 6492 nt1.55□□□□□ -2.16
GBP2P25555 SSK2YNR031C 4740 nt1.53□□□□□ -2.16
GBP2P25555 YOR316C-AYOR316C-A 210 nt1.53□□□□□ -2.16
GBP2P25555 MEC1YBR136W 7107 nt1.52□□□□□ -2.17
GBP2P25555 IRA1YBR140C 9279 nt1.51□□□□□ -2.17
GBP2P25555 tQ(UUG)E2tQ(UUG)E2 72 nt1.51□□□□□ -2.17
GBP2P25555 CCH1YGR217W 6120 nt1.43□□□□□ -2.18
GBP2P25555 YJL113WYJL113W 4647 nt1.41□□□□□ -2.18
GBP2P25555 SBH2YER019C-A 267 nt1.39□□□□□ -2.19
GBP2P25555 BUD3YCL014W 4911 nt1.36□□□□□ -2.19
GBP2P25555 PAU24YBR301W 363 nt1.35□□□□□ -2.19
GBP2P25555 YBL100W-BYBL100W-B 5313 nt1.35□□□□□ -2.19
GBP2P25555 HKR1YDR420W 5409 nt1.33□□□□□ -2.2
GBP2P25555 YOR192C-BYOR192C-B 5313 nt1.33□□□□□ -2.2
GBP2P25555 tC(GCA)QtC(GCA)Q 76 nt1.3□□□□□ -2.2
GBP2P25555 tH(GUG)E1tH(GUG)E1 72 nt1.29□□□□□ -2.2
GBP2P25555 tH(GUG)E2tH(GUG)E2 72 nt1.29□□□□□ -2.2
GBP2P25555 tH(GUG)G1tH(GUG)G1 72 nt1.29□□□□□ -2.2
GBP2P25555 tH(GUG)G2tH(GUG)G2 72 nt1.29□□□□□ -2.2
GBP2P25555 tH(GUG)HtH(GUG)H 72 nt1.29□□□□□ -2.2
GBP2P25555 tH(GUG)KtH(GUG)K 72 nt1.29□□□□□ -2.2
GBP2P25555 tH(GUG)MtH(GUG)M 72 nt1.29□□□□□ -2.2
GBP2P25555 DOP1YDR141C 5097 nt1.28□□□□□ -2.2
GBP2P25555 LTE1YAL024C 4308 nt1.28□□□□□ -2.2
GBP2P25555 RKR1YMR247C 4689 nt1.25□□□□□ -2.21
GBP2P25555 SCC2YDR180W 4482 nt1.23□□□□□ -2.21
GBP2P25555 YML100W-AYML100W-A 174 nt1.23□□□□□ -2.21
GBP2P25555 IML1YJR138W 4755 nt1.17□□□□□ -2.22
GBP2P25555 tV(UAC)BtV(UAC)B 74 nt1.16□□□□□ -2.22
GBP2P25555 tV(UAC)DtV(UAC)D 74 nt1.16□□□□□ -2.22
GBP2P25555 ESP1YGR098C 4893 nt1.16□□□□□ -2.22
GBP2P25555 YPR137C-BYPR137C-B 5268 nt1.14□□□□□ -2.23
GBP2P25555 BEM2YER155C 6504 nt1.13□□□□□ -2.23
GBP2P25555 YOL014WYOL014W 375 nt1.13□□□□□ -2.23
GBP2P25555 RPL41BYDL133C-A 78 nt1.11□□□□□ -2.23
GBP2P25555 YJR029WYJR029W 5268 nt1.11□□□□□ -2.23
GBP2P25555 FMP27YLR454W 7887 nt1.11□□□□□ -2.23
GBP2P25555 snR6snR6 112 nt1.1□□□□□ -2.23
GBP2P25555 tF(GAA)BtF(GAA)B 73 nt1.09□□□□□ -2.23
GBP2P25555 tF(GAA)FtF(GAA)F 73 nt1.09□□□□□ -2.23
GBP2P25555 tF(GAA)GtF(GAA)G 73 nt1.09□□□□□ -2.23
GBP2P25555 tF(GAA)H1tF(GAA)H1 73 nt1.09□□□□□ -2.23
GBP2P25555 tF(GAA)H2tF(GAA)H2 73 nt1.09□□□□□ -2.23
GBP2P25555 tF(GAA)MtF(GAA)M 73 nt1.09□□□□□ -2.23
GBP2P25555 tF(GAA)P1tF(GAA)P1 73 nt1.09□□□□□ -2.23
GBP2P25555 tF(GAA)P2tF(GAA)P2 73 nt1.09□□□□□ -2.23
GBP2P25555 YOR335W-AYOR335W-A 81 nt1.09□□□□□ -2.23
GBP2P25555 YKL145W-AYKL145W-A 93 nt1.06□□□□□ -2.24
GBP2P25555 IQG1YPL242C 4488 nt1.06□□□□□ -2.24
GBP2P25555 UTP20YBL004W 7482 nt1.04□□□□□ -2.24
GBP2P25555 snR58snR58 96 nt0.94□□□□□ -2.26
GBP2P25555 THO2YNL139C 4794 nt0.93□□□□□ -2.26
GBP2P25555 EMT1tM(CAU)D 73 nt0.9□□□□□ -2.27
GBP2P25555 EMT5tM(CAU)J1 73 nt0.9□□□□□ -2.27
GBP2P25555 EMT3tM(CAU)J2 73 nt0.9□□□□□ -2.27
GBP2P25555 EMT4tM(CAU)M 73 nt0.9□□□□□ -2.27
GBP2P25555 EMT2tM(CAU)O2 73 nt0.9□□□□□ -2.27
GBP2P25555 snR73snR73 106 nt0.89□□□□□ -2.27
GBP2P25555 MLP1YKR095W 5628 nt0.8□□□□□ -2.28
GBP2P25555 YMR272W-AYMR272W-A 114 nt0.78□□□□□ -2.28
GBP2P25555 YOR186C-AYOR186C-A 210 nt0.77□□□□□ -2.29
GBP2P25555 URB1YKL014C 5295 nt0.71□□□□□ -2.3
GBP2P25555 PAU9YBL108C-A 129 nt0.71□□□□□ -2.3
GBP2P25555 tT(AGU)BtT(AGU)B 73 nt0.64□□□□□ -2.31
GBP2P25555 tT(AGU)CtT(AGU)C 73 nt0.64□□□□□ -2.31
GBP2P25555 tT(AGU)DtT(AGU)D 73 nt0.64□□□□□ -2.31
GBP2P25555 tT(AGU)HtT(AGU)H 73 nt0.64□□□□□ -2.31
GBP2P25555 tT(AGU)I1tT(AGU)I1 73 nt0.64□□□□□ -2.31
GBP2P25555 tT(AGU)I2tT(AGU)I2 73 nt0.64□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms