Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.18■□□□□ 0.34
CCL1P22362 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.18■□□□□ 0.34
CCL1P22362 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL1P22362 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.18■□□□□ 0.34
CCL1P22362 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL1P22362 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL1P22362 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL1P22362 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL1P22362 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.18■□□□□ 0.34
CCL1P22362 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL1P22362 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL1P22362 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL1P22362 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.17■□□□□ 0.34
CCL1P22362 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL1P22362 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL1P22362 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCL1P22362 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.17■□□□□ 0.34
CCL1P22362 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.17■□□□□ 0.34
CCL1P22362 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL1P22362 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.17■□□□□ 0.34
CCL1P22362 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL1P22362 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL1P22362 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CCL1P22362 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL1P22362 AL162430.1-201ENST00000480705 870 ntBASIC17.17■□□□□ 0.34
CCL1P22362 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL1P22362 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL1P22362 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.17■□□□□ 0.34
CCL1P22362 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCL1P22362 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL1P22362 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.17■□□□□ 0.34
CCL1P22362 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CCL1P22362 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCL1P22362 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCL1P22362 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.16■□□□□ 0.34
CCL1P22362 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CCL1P22362 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.16■□□□□ 0.34
CCL1P22362 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.16■□□□□ 0.34
CCL1P22362 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL1P22362 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL1P22362 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCL1P22362 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCL1P22362 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCL1P22362 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCL1P22362 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.16■□□□□ 0.34
CCL1P22362 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.16■□□□□ 0.34
CCL1P22362 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.16■□□□□ 0.34
CCL1P22362 PHGDH-210ENST00000641115 1638 ntBASIC17.16■□□□□ 0.34
CCL1P22362 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL1P22362 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL1P22362 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL1P22362 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL1P22362 AC018445.3-201ENST00000624177 1945 ntBASIC17.15■□□□□ 0.34
CCL1P22362 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.15■□□□□ 0.34
CCL1P22362 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL1P22362 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL1P22362 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL1P22362 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL1P22362 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCL1P22362 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.15■□□□□ 0.34
CCL1P22362 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.15■□□□□ 0.34
CCL1P22362 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.15■□□□□ 0.34
CCL1P22362 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.15■□□□□ 0.34
CCL1P22362 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.15■□□□□ 0.34
CCL1P22362 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCL1P22362 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.15■□□□□ 0.34
CCL1P22362 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCL1P22362 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL1P22362 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CCL1P22362 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCL1P22362 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCL1P22362 KRT17P1-201ENST00000399211 1546 ntBASIC17.15■□□□□ 0.34
CCL1P22362 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL1P22362 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL1P22362 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL1P22362 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CCL1P22362 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL1P22362 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCL1P22362 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL1P22362 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL1P22362 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL1P22362 AC093787.1-201ENST00000450396 207 ntBASIC17.14■□□□□ 0.33
CCL1P22362 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.14■□□□□ 0.33
CCL1P22362 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CCL1P22362 MIR5787-201ENST00000611784 55 ntBASIC17.14■□□□□ 0.33
CCL1P22362 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCL1P22362 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCL1P22362 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCL1P22362 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL1P22362 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCL1P22362 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.14■□□□□ 0.33
CCL1P22362 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCL1P22362 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCL1P22362 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL1P22362 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL1P22362 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL1P22362 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms