Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ATF1P18846 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 KRT19P1-201ENST00000405746 1186 ntBASIC17.48■□□□□ 0.39
ATF1P18846 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.48■□□□□ 0.39
ATF1P18846 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ATF1P18846 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.48■□□□□ 0.39
ATF1P18846 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 KRT8P36-201ENST00000489121 1440 ntBASIC17.47■□□□□ 0.39
ATF1P18846 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.47■□□□□ 0.39
ATF1P18846 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ATF1P18846 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATF1P18846 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATF1P18846 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.47■□□□□ 0.39
ATF1P18846 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.47■□□□□ 0.39
ATF1P18846 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.47■□□□□ 0.39
ATF1P18846 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.47■□□□□ 0.39
ATF1P18846 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.47■□□□□ 0.39
ATF1P18846 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.47■□□□□ 0.39
ATF1P18846 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.47■□□□□ 0.39
ATF1P18846 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
ATF1P18846 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.47■□□□□ 0.39
ATF1P18846 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATF1P18846 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
ATF1P18846 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.47■□□□□ 0.39
ATF1P18846 NEFHP1-201ENST00000412845 2629 ntBASIC17.47■□□□□ 0.39
ATF1P18846 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.47■□□□□ 0.39
ATF1P18846 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATF1P18846 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.47■□□□□ 0.39
ATF1P18846 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ATF1P18846 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
ATF1P18846 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.46■□□□□ 0.39
ATF1P18846 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF1P18846 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATF1P18846 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATF1P18846 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF1P18846 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.46■□□□□ 0.39
ATF1P18846 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATF1P18846 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATF1P18846 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATF1P18846 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.46■□□□□ 0.39
ATF1P18846 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF1P18846 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
ATF1P18846 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF1P18846 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.46■□□□□ 0.39
ATF1P18846 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF1P18846 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.46■□□□□ 0.39
ATF1P18846 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.46■□□□□ 0.39
ATF1P18846 ZNRF2P3-201ENST00000424200 374 ntBASIC17.46■□□□□ 0.39
ATF1P18846 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.46■□□□□ 0.39
ATF1P18846 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.46■□□□□ 0.39
ATF1P18846 FAM21FP-204ENST00000608637 956 ntBASIC17.46■□□□□ 0.39
ATF1P18846 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ATF1P18846 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ATF1P18846 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF1P18846 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF1P18846 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ATF1P18846 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATF1P18846 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF1P18846 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.46■□□□□ 0.39
ATF1P18846 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.46■□□□□ 0.38
ATF1P18846 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.46■□□□□ 0.38
ATF1P18846 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATF1P18846 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ATF1P18846 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ATF1P18846 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.45■□□□□ 0.38
ATF1P18846 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
ATF1P18846 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 CDV3P1-201ENST00000471403 739 ntBASIC17.45■□□□□ 0.38
ATF1P18846 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.45■□□□□ 0.38
ATF1P18846 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.45■□□□□ 0.38
ATF1P18846 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF1P18846 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ATF1P18846 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATF1P18846 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.44■□□□□ 0.38
ATF1P18846 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATF1P18846 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.44■□□□□ 0.38
ATF1P18846 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.44■□□□□ 0.38
ATF1P18846 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms