Protein–RNA interactions for Protein: P11229

CHRM1, Muscarinic acetylcholine receptor M1, humanhuman

Predicted RBP Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM1P11229 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.83■□□□□ 0.93
CHRM1P11229 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.83■□□□□ 0.93
CHRM1P11229 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.83■□□□□ 0.93
CHRM1P11229 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CHRM1P11229 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.83■□□□□ 0.92
CHRM1P11229 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHRM1P11229 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.92
CHRM1P11229 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CHRM1P11229 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.83■□□□□ 0.92
CHRM1P11229 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHRM1P11229 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRM1P11229 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.82■□□□□ 0.92
CHRM1P11229 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.82■□□□□ 0.92
CHRM1P11229 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRM1P11229 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRM1P11229 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRM1P11229 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRM1P11229 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRM1P11229 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRM1P11229 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.82■□□□□ 0.92
CHRM1P11229 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.82■□□□□ 0.92
CHRM1P11229 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.82■□□□□ 0.92
CHRM1P11229 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRM1P11229 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRM1P11229 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRM1P11229 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CHRM1P11229 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHRM1P11229 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.81■□□□□ 0.92
CHRM1P11229 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRM1P11229 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.81■□□□□ 0.92
CHRM1P11229 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHRM1P11229 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.81■□□□□ 0.92
CHRM1P11229 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRM1P11229 POM121L13P-201ENST00000422362 380 ntBASIC20.81■□□□□ 0.92
CHRM1P11229 C1QBPP2-201ENST00000528754 825 ntBASIC20.81■□□□□ 0.92
CHRM1P11229 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHRM1P11229 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.81■□□□□ 0.92
CHRM1P11229 Z99916.2-201ENST00000604037 246 ntBASIC20.81■□□□□ 0.92
CHRM1P11229 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHRM1P11229 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRM1P11229 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRM1P11229 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRM1P11229 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRM1P11229 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.81■□□□□ 0.92
CHRM1P11229 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.81■□□□□ 0.92
CHRM1P11229 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRM1P11229 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRM1P11229 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CHRM1P11229 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHRM1P11229 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.8■□□□□ 0.92
CHRM1P11229 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.8■□□□□ 0.92
CHRM1P11229 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRM1P11229 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.8■□□□□ 0.92
CHRM1P11229 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CHRM1P11229 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.8■□□□□ 0.92
CHRM1P11229 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRM1P11229 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.8■□□□□ 0.92
CHRM1P11229 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CHRM1P11229 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CHRM1P11229 FEM1AP4-201ENST00000443167 1987 ntBASIC20.8■□□□□ 0.92
CHRM1P11229 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRM1P11229 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.8■□□□□ 0.92
CHRM1P11229 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRM1P11229 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRM1P11229 PAX6-247ENST00000638965 979 ntTSL 5 BASIC20.8■□□□□ 0.92
CHRM1P11229 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRM1P11229 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRM1P11229 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CHRM1P11229 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.8■□□□□ 0.92
CHRM1P11229 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRM1P11229 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.8■□□□□ 0.92
CHRM1P11229 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.79■□□□□ 0.92
CHRM1P11229 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRM1P11229 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRM1P11229 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.79■□□□□ 0.92
CHRM1P11229 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CHRM1P11229 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.79■□□□□ 0.92
CHRM1P11229 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRM1P11229 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.79■□□□□ 0.92
CHRM1P11229 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.79■□□□□ 0.92
CHRM1P11229 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRM1P11229 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
CHRM1P11229 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.79■□□□□ 0.92
CHRM1P11229 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRM1P11229 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRM1P11229 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRM1P11229 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC20.79■□□□□ 0.92
CHRM1P11229 KRT17P3-201ENST00000420566 1262 ntBASIC20.79■□□□□ 0.92
CHRM1P11229 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.79■□□□□ 0.92
CHRM1P11229 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CHRM1P11229 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.79■□□□□ 0.92
CHRM1P11229 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CHRM1P11229 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.79■□□□□ 0.92
CHRM1P11229 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRM1P11229 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CHRM1P11229 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHRM1P11229 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRM1P11229 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.78■□□□□ 0.92
CHRM1P11229 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.78■□□□□ 0.92
CHRM1P11229 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms