Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBCP0CG48 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
UBCP0CG48 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
UBCP0CG48 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.45■□□□□ 0.38
UBCP0CG48 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
UBCP0CG48 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBCP0CG48 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
UBCP0CG48 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.45■□□□□ 0.38
UBCP0CG48 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.45■□□□□ 0.38
UBCP0CG48 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBCP0CG48 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.45■□□□□ 0.38
UBCP0CG48 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBCP0CG48 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBCP0CG48 KRT18P61-201ENST00000585825 1298 ntBASIC17.45■□□□□ 0.38
UBCP0CG48 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBCP0CG48 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.45■□□□□ 0.38
UBCP0CG48 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBCP0CG48 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBCP0CG48 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.45■□□□□ 0.38
UBCP0CG48 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.45■□□□□ 0.38
UBCP0CG48 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBCP0CG48 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.45■□□□□ 0.38
UBCP0CG48 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
UBCP0CG48 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBCP0CG48 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.44■□□□□ 0.38
UBCP0CG48 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
UBCP0CG48 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBCP0CG48 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.44■□□□□ 0.38
UBCP0CG48 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.44■□□□□ 0.38
UBCP0CG48 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.44■□□□□ 0.38
UBCP0CG48 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
UBCP0CG48 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.44■□□□□ 0.38
UBCP0CG48 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBCP0CG48 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.44■□□□□ 0.38
UBCP0CG48 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.44■□□□□ 0.38
UBCP0CG48 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
UBCP0CG48 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBCP0CG48 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBCP0CG48 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBCP0CG48 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.44■□□□□ 0.38
UBCP0CG48 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.44■□□□□ 0.38
UBCP0CG48 AC007322.4-201ENST00000509611 723 ntBASIC17.44■□□□□ 0.38
UBCP0CG48 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.44■□□□□ 0.38
UBCP0CG48 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBCP0CG48 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
UBCP0CG48 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBCP0CG48 AC013268.1-206ENST00000638368 961 ntBASIC17.44■□□□□ 0.38
UBCP0CG48 AC112229.1-201ENST00000639295 961 ntBASIC17.44■□□□□ 0.38
UBCP0CG48 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBCP0CG48 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.44■□□□□ 0.38
UBCP0CG48 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBCP0CG48 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBCP0CG48 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBCP0CG48 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBCP0CG48 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBCP0CG48 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBCP0CG48 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.43■□□□□ 0.38
UBCP0CG48 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBCP0CG48 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBCP0CG48 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBCP0CG48 ZNRF2P3-201ENST00000424200 374 ntBASIC17.43■□□□□ 0.38
UBCP0CG48 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.43■□□□□ 0.38
UBCP0CG48 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
UBCP0CG48 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.43■□□□□ 0.38
UBCP0CG48 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBCP0CG48 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.43■□□□□ 0.38
UBCP0CG48 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBCP0CG48 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBCP0CG48 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBCP0CG48 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.42■□□□□ 0.38
UBCP0CG48 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.42■□□□□ 0.38
UBCP0CG48 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBCP0CG48 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
UBCP0CG48 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBCP0CG48 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UBCP0CG48 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBCP0CG48 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
UBCP0CG48 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBCP0CG48 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
UBCP0CG48 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBCP0CG48 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBCP0CG48 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBCP0CG48 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBCP0CG48 KRT18P11-201ENST00000435214 1283 ntBASIC17.42■□□□□ 0.38
UBCP0CG48 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.42■□□□□ 0.38
UBCP0CG48 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
UBCP0CG48 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBCP0CG48 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
UBCP0CG48 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.42■□□□□ 0.38
UBCP0CG48 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.42■□□□□ 0.38
UBCP0CG48 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.42■□□□□ 0.38
UBCP0CG48 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.42■□□□□ 0.38
UBCP0CG48 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBCP0CG48 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBCP0CG48 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBCP0CG48 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.42■□□□□ 0.38
UBCP0CG48 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBCP0CG48 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms