Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.26■□□□□ 0.83
HLA-DQB2P05538 PNMA6B-201ENST00000538162 1200 ntBASIC20.26■□□□□ 0.83
HLA-DQB2P05538 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 AC006557.6-201ENST00000623071 864 ntBASIC20.26■□□□□ 0.83
HLA-DQB2P05538 AFG3L1P-217ENST00000557444 2447 ntBASIC20.26■□□□□ 0.83
HLA-DQB2P05538 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQB2P05538 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQB2P05538 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.25■□□□□ 0.83
HLA-DQB2P05538 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQB2P05538 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.25■□□□□ 0.83
HLA-DQB2P05538 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.25■□□□□ 0.83
HLA-DQB2P05538 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQB2P05538 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HLA-DQB2P05538 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.25■□□□□ 0.83
HLA-DQB2P05538 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQB2P05538 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HLA-DQB2P05538 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.25■□□□□ 0.83
HLA-DQB2P05538 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQB2P05538 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.25■□□□□ 0.83
HLA-DQB2P05538 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQB2P05538 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.24■□□□□ 0.83
HLA-DQB2P05538 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQB2P05538 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQB2P05538 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQB2P05538 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.24■□□□□ 0.83
HLA-DQB2P05538 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQB2P05538 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQB2P05538 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.24■□□□□ 0.83
HLA-DQB2P05538 AL390719.1-204ENST00000412397 1219 ntBASIC20.24■□□□□ 0.83
HLA-DQB2P05538 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.24■□□□□ 0.83
HLA-DQB2P05538 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.24■□□□□ 0.83
HLA-DQB2P05538 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.24■□□□□ 0.83
HLA-DQB2P05538 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HLA-DQB2P05538 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
HLA-DQB2P05538 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQB2P05538 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.24■□□□□ 0.83
HLA-DQB2P05538 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQB2P05538 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQB2P05538 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQB2P05538 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQB2P05538 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.22■□□□□ 0.83
HLA-DQB2P05538 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.22■□□□□ 0.83
HLA-DQB2P05538 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQB2P05538 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.22■□□□□ 0.83
HLA-DQB2P05538 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HLA-DQB2P05538 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQB2P05538 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQB2P05538 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.22■□□□□ 0.83
HLA-DQB2P05538 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQB2P05538 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQB2P05538 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQB2P05538 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms