Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGN1P05114 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.03■□□□□ 0.48
HMGN1P05114 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.03■□□□□ 0.48
HMGN1P05114 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
HMGN1P05114 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.03■□□□□ 0.48
HMGN1P05114 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.03■□□□□ 0.48
HMGN1P05114 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGN1P05114 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGN1P05114 AC009237.14-201ENST00000609975 1594 ntBASIC18.03■□□□□ 0.48
HMGN1P05114 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGN1P05114 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGN1P05114 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGN1P05114 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGN1P05114 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMGN1P05114 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGN1P05114 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGN1P05114 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGN1P05114 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGN1P05114 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HMGN1P05114 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMGN1P05114 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMGN1P05114 KRT19P1-201ENST00000405746 1186 ntBASIC18.02■□□□□ 0.48
HMGN1P05114 YBX1P1-201ENST00000445822 960 ntBASIC18.02■□□□□ 0.48
HMGN1P05114 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGN1P05114 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMGN1P05114 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.02■□□□□ 0.48
HMGN1P05114 AC004854.2-201ENST00000608450 1441 ntBASIC18.02■□□□□ 0.48
HMGN1P05114 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.02■□□□□ 0.48
HMGN1P05114 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMGN1P05114 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HMGN1P05114 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.02■□□□□ 0.47
HMGN1P05114 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMGN1P05114 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HMGN1P05114 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMGN1P05114 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMGN1P05114 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMGN1P05114 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HMGN1P05114 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGN1P05114 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMGN1P05114 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGN1P05114 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGN1P05114 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGN1P05114 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGN1P05114 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGN1P05114 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGN1P05114 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGN1P05114 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGN1P05114 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGN1P05114 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGN1P05114 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGN1P05114 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.01■□□□□ 0.47
HMGN1P05114 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.01■□□□□ 0.47
HMGN1P05114 KRT18P14-201ENST00000534205 1250 ntBASIC18.01■□□□□ 0.47
HMGN1P05114 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGN1P05114 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGN1P05114 AL020996.1-203ENST00000536896 2307 ntBASIC18.01■□□□□ 0.47
HMGN1P05114 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGN1P05114 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
HMGN1P05114 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.01■□□□□ 0.47
HMGN1P05114 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGN1P05114 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.01■□□□□ 0.47
HMGN1P05114 AP000974.1-201ENST00000623909 2387 ntBASIC18.01■□□□□ 0.47
HMGN1P05114 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGN1P05114 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18■□□□□ 0.47
HMGN1P05114 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HMGN1P05114 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGN1P05114 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HMGN1P05114 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18■□□□□ 0.47
HMGN1P05114 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGN1P05114 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGN1P05114 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
HMGN1P05114 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HMGN1P05114 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HMGN1P05114 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18■□□□□ 0.47
HMGN1P05114 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGN1P05114 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HMGN1P05114 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGN1P05114 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HMGN1P05114 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
HMGN1P05114 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGN1P05114 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HMGN1P05114 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18■□□□□ 0.47
HMGN1P05114 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HMGN1P05114 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGN1P05114 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGN1P05114 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
HMGN1P05114 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
HMGN1P05114 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGN1P05114 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGN1P05114 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGN1P05114 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGN1P05114 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGN1P05114 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGN1P05114 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGN1P05114 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGN1P05114 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.99■□□□□ 0.47
HMGN1P05114 AL591742.1-201ENST00000604433 565 ntBASIC17.99■□□□□ 0.47
HMGN1P05114 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGN1P05114 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGN1P05114 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms