Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA1P01909 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
HLA-DQA1P01909 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HLA-DQA1P01909 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DQA1P01909 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA1P01909 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DQA1P01909 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA1P01909 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA1P01909 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DQA1P01909 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA1P01909 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA1P01909 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
HLA-DQA1P01909 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA1P01909 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DQA1P01909 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA1P01909 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 AL390961.4-201ENST00000623958 2535 ntBASIC14.99□□□□□ -0.01
HLA-DQA1P01909 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA1P01909 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 AL356441.2-201ENST00000443009 864 ntBASIC14.98□□□□□ -0.01
HLA-DQA1P01909 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 AL032819.2-201ENST00000624543 2162 ntBASIC14.98□□□□□ -0.01
HLA-DQA1P01909 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQA1P01909 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 HTR7P1-202ENST00000624664 4411 ntBASIC14.97□□□□□ -0.01
HLA-DQA1P01909 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA1P01909 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA1P01909 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms